Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0734 ATGGGTGGGAAGAGATCTGCTTTAGAGTACGAGAGAGTGAAGATCTATGGACAAGTTTTATTGGGATTTATGTTGATCTGTACGATTCAGATATCGCGTGCAGACACTAATCCTACCGACGTTGCTGCTTTAAATAACTTATATGCTGCTCTGGGCTACCCTGTTCTCCCTGGGTGGGTTCCCAGTGGGGGAGACCCATGTGGACAAGCGTGGCAAGGCATTCAATGTAATGGTTCAGTTATACAGAAAATAGTTCTGAATGGTGCAAATTTGGGAGGCGAACTGGGTGATAGCTTGGGAAGTTTTGTTTCCATCAGAGCAATAGATCTAAGCAACAACGTCATTGGGGGAAGTATTCCATCCAGTTTGCCTGTCTCCATGCAAAATTTTTTTCTTTCAGATAACCGGTTCACTGGAAGTATCCCAACCTCTTTATCCACATTGATTGAACTGTCAGATATGTCTCTTAATGAGAATCATTTAACTGGAGAAATACCGGATGCCTTTCAATCACTTACAAAATTGATCAATCTAGATTTATCTAGTAATAACTTGAGTGGGGAACTGCCTCCATCTGTAGAGAATTTGTCAGCTCTGACCACCCTACATTTGCAGAACAATCAACTATCTGGGACCCTTGATGATTTACAAGACCTTCCACTGAAAGATTTAAATGTAGAGAACAACCAATTCAATGGACCGATACCTCAAAAGTTGCTAAGCATCCCAAACTTCAGAAAAGATGGAAACCCATTTAATGTTAATGCTACTATAGCTCCGGCTCCTCCACCTCATTCTCCAGTGACAGCACCACCAGGAACCCCAGTTTCTAGGGCACCAACTTCCGGACGCATACCTACTAGACAGGCTAATGGACCAACTGCGTCAAAGGAATCAAATTCTGGAAAATCAAAGAAAACCACCAAAAGGGTGGTTTGGATATCTATTGCAAGCGTATTAGGATTTATTATTTTGGCACTGGCATGTATTCTATTTCTTCCAAGATGTAGCAGAAAGGAAAGGGTTGGCAGAATTTCCAATCAACATCAAATTGGTGCATATGGAGATGACAGACAAAATCCTAGGGATTATGGAGCTTTAGTCCAACCACCCATACCAAAGGGGGCTGTTCTGAGGCCAAAAGAAGATCATCAAGCAGAGACAGGGAGGGTGGGAGCTATTCCAAGGCCACAGGATGAGCAAGAGAAAGATGTGCAGAGAATGGGAACAATACCAAGGCAGGAGGATCATGAGATAGATATGAGTGCACTAGATGTATATTCATTGCCTCCCCCTCCTCCACCTCCACCACCACCTCCACCACCACCTCCTCCTCCTCCTCCCCCACCACCACCACTTACTGAGAAGGTGACTGTTGAACCAGTCGCTTTTCGCCGAGGGACTACAGTCAATCCTTCCATAAATAATCCAGTTCCTCCCACTTTTGCGAAATATTTCACCATTGCATCCCTTCAGCAGTATACAAACAGCTTTTCTCAAGAAAACCTTATTGGAGGAGGCATGCTGGGGACTGTGTACAGGGCAGAGCTTCCTGATGGGAAGCTACTTGCTGTGAAGAAACTGGACAAGAGAGCTTCTGATCACCAAAAGGATCATGAGTTTCTTGAACTGGTAAACAGTATTGACAGAATCAGGCATGCAAATATTGTTGAGCTTGTTGGTTACTGTGCAGAGCATGGCCAAAGGCTTCTGATCTATGAGTACTGTAGCAACGGGTCACTGCAAGATGCACTCCATTCAGATGATGAGTTCAAAACAAGACTGTCATGGAATGTTCGCATTAGGATAGCACTTGGGGCAGCTAGAGCCTTAGAGTATTTGCATGAGATCTGTCAGCCACCTGTTGTACACAGAAATTTCAAGTCTGCCAATATTCTCCTTGACGATGATTTATCTGTGCTCGTATCTGATTGTGGTTTGGCTCCCTTGATAGCTTCAGGTTCAGTAAGTCAGCTCTCTGGACAACTGCTAACAGCTTATGGCTATGGAGCTCCGGAATTTGAGTCAGGAATTTACACAGAACAGAGTGATGTGTACAGCTTTGGAGTGGTTATGTTGGAACTTTTGACGGGCCGACAGTCCTATGACAGGACACGGGTACGAGGGGAGCAGTTTCTAGTAAGATGGGCAATTCCCCAACTTCATGACATCGAGGCATTATCAAGTATGGTTGATCCGTCTCTCAATGGAGATTACCCCACCAAATCATTGTCAAACTTTGCAGATATTATTTCTCAATGTGTTCAGTCAGAGCCAGAATTTAGGCCACCGATGTCAGAGGTTGTTCAGTACTTATTAGATATGATAAGGAGGGATTCCCACAGAAGTGGATCTAATGAAGACTGA 2367 0.4415 MGGKRSALEYERVKIYGQVLLGFMLICTIQISRADTNPTDVAALNNLYAALGYPVLPGWVPSGGDPCGQAWQGIQCNGSVIQKIVLNGANLGGELGDSLGSFVSIRAIDLSNNVIGGSIPSSLPVSMQNFFLSDNRFTGSIPTSLSTLIELSDMSLNENHLTGEIPDAFQSLTKLINLDLSSNNLSGELPPSVENLSALTTLHLQNNQLSGTLDDLQDLPLKDLNVENNQFNGPIPQKLLSIPNFRKDGNPFNVNATIAPAPPPHSPVTAPPGTPVSRAPTSGRIPTRQANGPTASKESNSGKSKKTTKRVVWISIASVLGFIILALACILFLPRCSRKERVGRISNQHQIGAYGDDRQNPRDYGALVQPPIPKGAVLRPKEDHQAETGRVGAIPRPQDEQEKDVQRMGTIPRQEDHEIDMSALDVYSLPPPPPPPPPPPPPPPPPPPPPPPLTEKVTVEPVAFRRGTTVNPSINNPVPPTFAKYFTIASLQQYTNSFSQENLIGGGMLGTVYRAELPDGKLLAVKKLDKRASDHQKDHEFLELVNSIDRIRHANIVELVGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNVRIRIALGAARALEYLHEICQPPVVHRNFKSANILLDDDLSVLVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGIYTEQSDVYSFGVVMLELLTGRQSYDRTRVRGEQFLVRWAIPQLHDIEALSSMVDPSLNGDYPTKSLSNFADIISQCVQSEPEFRPPMSEVVQYLLDMIRRDSHRSGSNED 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0734 788 MobiDBLite consensus disorder prediction 260 307 - -
Glsi04g0734 788 MobiDBLite consensus disorder prediction 396 422 - -
Glsi04g0734 788 Gene3D Transferase(Phosphotransferase) domain 1 576 787 - -
Glsi04g0734 788 Pfam Protein tyrosine and serine/threonine kinase 501 772 IPR001245 GO:0004672|GO:0006468
Glsi04g0734 788 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Glsi04g0734 788 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 576 786 - -
Glsi04g0734 788 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Glsi04g0734 788 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0734 788 MobiDBLite consensus disorder prediction 427 456 - -
Glsi04g0734 788 SUPERFAMILY Formin homology 2 domain (FH2 domain) 442 452 - -
Glsi04g0734 788 SUPERFAMILY Protein kinase-like (PK-like) 472 772 IPR011009 -
Glsi04g0734 788 Gene3D Phosphorylase Kinase; domain 1 470 575 - -
Glsi04g0734 788 SUPERFAMILY L domain-like 36 244 - -
Glsi04g0734 788 MobiDBLite consensus disorder prediction 280 301 - -
Glsi04g0734 788 MobiDBLite consensus disorder prediction 260 274 - -
Glsi04g0734 788 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 466 575 - -
Glsi04g0734 788 Gene3D Ribonuclease Inhibitor 37 255 IPR032675 -
Glsi04g0734 788 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 265 - -
Glsi04g0734 788 MobiDBLite consensus disorder prediction 395 456 - -
Glsi04g0734 788 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0734 Glsi-ChrGlsi04 5163877 5171419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0734 31 784 Strubbelig Receptor Gene Family AT4G03390 64.099 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Glsi04g0734 PK_Tyr_Ser-Thr 6.6e-43 CL0016