Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0718 ATGACGATTGCATCCATCTTCAGCAAGGCTTCCAGGACCTTGCATAGCTACCCTTATTGCTCTAAGCTTCTGCTCCTCTGTACTCTCAGTGGTGGAGGTGTGGTGGCATACTCAGAATTACAATCCGATTCTGGATCTCCTAGTATTGACGTTGATGAACCCAGAAAAAAGAGAGTGGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCTTCAATATATGATGTTCAGGTTGTTTCACCTCGTAATTACTTTGCATTTACTCCCTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCACGGAGCATAGTGGAGCCGGTCCGAAACATCATAAAAAAGAGAAAAGGATACATAAAATTTTGGGAGGCAGAATGTGTCAAGATTGATGGTGCAAACAAGAAGATTTTTTGTCGATCCAATATTGACGGCAACTTAGTGGGAAGTGGCGAATTTTCTGTGGAATATGACTTTTTGGTTGTAGCAACAGGAGCACAAGTAAATACTTTTAACACTCCAGGTGTTAAGGAGAACTGTCATTTTCTAAAGGAGGTGGAGGATGCTCAGAAGATCAGAATGTCAGTGATAGATTGCTTTGAGAAGTCTATTCTTCCTAGTCTATCTGAAGAAGAGAGACAGACAAATCTTCATTTTGTAATTGTTGGAGGGGGTCCAACTGGTGTGGAATTTGCCGCAGAGCTGCATGATTATGTCCAAGAAGATCTAATCAAATTGTACCCGTCTGTCAAAGATATAGTGAAAATAACAGTGATCCAATCGGGAGATCACATCTTGAACATGTTTGATGAAAGAATCAGCTCATTTGCTGAGCTGAAGTTTAGAAGAGATGGTATAGATATTCAAACAGGATGCCGAGTTGTCAGTGTTTCTAACAAGGAAATCACAATGAAGGTGAAATCAACAGGAGAGGTTTGCTCTGTACCCCATGGATTGATTGTCTGGTCCACTGGCATCGGGACTCTTCCGGTTGTGAGGGACTTTATGGAACAAATTGGGCAGGCTAAAAGAAAGGTCCTAGCGACTGATGAGTGGTTGCGAGTTTTGGGATGTGAAGCTGTTTATGCCATTGGTGACTGTGCTTCGATAAATCAACGTAAAATCATGGATGACGTCTTGGCCATTTTCAAAGCTGCAGACAAAGACAACTCTGGCACCTTAACTGTTGAAGAATTCCAGGATGTGATGGATGACATCATCCTAAGATATCCCCAAATGGAACTTTATTTAAAGAGCAAGCATAGCCTTGATGTGACCGCACTGTGGAAAGATCCGCAAGGGAATGACAGAGATTCAATAGACGCAGAAGGGTTTAAGCTTGCCCTGTCTCATGTGGATTCACAGATGAAGAGTCTGCCAGCAACCGCACAGGTTGCTGCCCAACAGGGTGCATATCTAGCTCGATGCTTCAACCACATGGAGCAATGTGTAGAGAATCCTGAAGGTCCTAGAAGATTTAGAGGATCTGGACGTCATATGTTTCGTCCCTTCCGGTATAAGCATTTTGGGCAATTTGCTCCTCTGGGTGGGGAGCAAGCAGCGGCTGAACTTCCTGGAGACTGGGTTTCCATTGGTCACAGCACTCAGTGGCTTTGGTATTCTGTATATGCCAGCAAGCAAGTGAGCTGGCGCACAAGGGTGTTGGTCATGTCTGATTGGACAAGACGATTCATCTTTGGGAGAGATTCAAGTCGTATTTAA 1737 0.4393 MTIASIFSKASRTLHSYPYCSKLLLLCTLSGGGVVAYSELQSDSGSPSIDVDEPRKKRVVVLGTGWAGTSFLKDLDASIYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGYIKFWEAECVKIDGANKKIFCRSNIDGNLVGSGEFSVEYDFLVVATGAQVNTFNTPGVKENCHFLKEVEDAQKIRMSVIDCFEKSILPSLSEEERQTNLHFVIVGGGPTGVEFAAELHDYVQEDLIKLYPSVKDIVKITVIQSGDHILNMFDERISSFAELKFRRDGIDIQTGCRVVSVSNKEITMKVKSTGEVCSVPHGLIVWSTGIGTLPVVRDFMEQIGQAKRKVLATDEWLRVLGCEAVYAIGDCASINQRKIMDDVLAIFKAADKDNSGTLTVEEFQDVMDDIILRYPQMELYLKSKHSLDVTALWKDPQGNDRDSIDAEGFKLALSHVDSQMKSLPATAQVAAQQGAYLARCFNHMEQCVENPEGPRRFRGSGRHMFRPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRVLVMSDWTRRFIFGRDSSRI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0718 578 Gene3D - 47 396 - -
Glsi04g0718 578 Gene3D - 441 577 - -
Glsi04g0718 578 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Glsi04g0718 578 Pfam EF hand 384 409 IPR002048 GO:0005509
Glsi04g0718 578 SUPERFAMILY EF-hand 337 465 IPR011992 -
Glsi04g0718 578 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Glsi04g0718 578 SUPERFAMILY FAD/NAD(P)-binding domain 221 376 IPR036188 -
Glsi04g0718 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Glsi04g0718 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 223 241 - -
Glsi04g0718 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 59 78 - -
Glsi04g0718 578 SMART efh_1 383 411 IPR002048 GO:0005509
Glsi04g0718 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 48 408 - -
Glsi04g0718 578 PANTHER NADH DEHYDROGENASE 53 578 IPR045024 GO:0003954|GO:0006116
Glsi04g0718 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 425 577 - -
Glsi04g0718 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 381 IPR023753 GO:0016491
Glsi04g0718 578 SUPERFAMILY FAD/NAD(P)-binding domain 56 275 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0718 Glsi-ChrGlsi04 5068122 5078104 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0718 7 578 Chloroplast and Mitochondria Gene Families AT4G21490 65.451 0.0 779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0718 04 5068122 5078104 Glsi04g0718 04 5068122 5078104 ECH