Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0705 ATGGCAGACGCACGCACGCACAAGCTTCTTGAGCGATGTCAGGTTAGTCCAGCAGCACCTCCAGATGCTAGTAGAACTAACCTTCCCCTCACATTCCTAGACATATCTTTGGCAGGTCCGGTCTATGTGAGACGCCAATTCTTCTATCACTTTCCCTACCCAACCAACCATTTCATCCGCACTACGCTCCCCCCTCTCAAACACTCTCTCTCCCTCGCACTCCAACATTTTTTCCCTCTCTCCGGAAATCTCATCTGCCCACCGCCACCCCACAAGCCCTTTATCCATTGCACCGGAAAAGACTCTGTCATCTTAACCATCCTTGAGTCTGCTTCTGATTTCAAACATCTCTCAAGCAACCACCCCAGAAATCTTAAAGATTTAGATCACTTGGTTCCCAAGTTATCATTCATTACTAGTACATTGGATGATGATGATGACACACACGTCTTCCCAATTGTTGCCTTGCAAGTCACCGTTTTTCCTAACCATGGCCTTTGCATCGCTATCACGTACTGCCACGTGATGGATGACAGTTCTTGCAGCCATTTCATGAAATCATGGGCTTCCGTTTGTGGATCTGGTGGAGATATGAGTTTTCTTGAGAAGTCACTGCCATGCTATGATAGGGAAGTGATCAAAGACCCAAAGGGCCTTGAGGCTATTTTCTTGAGAGACTATTTTAAGGTGAGGTCAACATGGAAGGACAGTCTCGTGGGTAAAACTTCTGAGCGAGTAGATGGTGATCATGAATATTTTAAGGCAACCCTTGTGTTTGGCAGAAAGGACATCGAGGGACTGCAAAACTGGGCAATGAATGAGTGGAAGACAAACGACGAACCAAGCACACAGCAATATTTATCAAAATTTGTAGTGACGTGCGGTTTTGTATGGGCAAGCTTGGTTAAAACGAGGTATAAAAGTGAAGATGAAGAAGAGAAGGAGGAGTACTTCCGTTTTGCAGCAGATTGCAGAAGCCGTCTTGAGTATCCAATTCCAGAAACGTACTTTGGAAACTGCTTAACGCGATGCCATGCAACACTGAAGAGAAAAGAACTAAAGGGAGAAGAAGGGTTTTTGAACGCTGTCAAGGCGATTGAAAGGGCAATAATTAGTATGAAGAAAGAACCATTTGAAGATGCAGAAAACTGGAGGGAGAGGTTTATGAAAATGTTCGTTTTAGGAAGTTCAGTGCTGGTTACGGGGTCGCCAAAATTCACTGTTTATGAGACTGATTTTGGATTTGGAAGACCTAGCAAGGTTGAAATGGTACATTCCTTCAAGTGTATGTCTCTTGCTGAAAGTGGAAATGAAGAAGGTGGACTTGAGGTTGGCTTGATATTTAGGAGGGATGAAGAATATGAAGATTTCATTTGTGTCATTAAACAAGGACTCGAAGCTTTAAAGTCTTAA 1413 0.4388 MADARTHKLLERCQVSPAAPPDASRTNLPLTFLDISLAGPVYVRRQFFYHFPYPTNHFIRTTLPPLKHSLSLALQHFFPLSGNLICPPPPHKPFIHCTGKDSVILTILESASDFKHLSSNHPRNLKDLDHLVPKLSFITSTLDDDDDTHVFPIVALQVTVFPNHGLCIAITYCHVMDDSSCSHFMKSWASVCGSGGDMSFLEKSLPCYDREVIKDPKGLEAIFLRDYFKVRSTWKDSLVGKTSERVDGDHEYFKATLVFGRKDIEGLQNWAMNEWKTNDEPSTQQYLSKFVVTCGFVWASLVKTRYKSEDEEEKEEYFRFAADCRSRLEYPIPETYFGNCLTRCHATLKRKELKGEEGFLNAVKAIERAIISMKKEPFEDAENWRERFMKMFVLGSSVLVTGSPKFTVYETDFGFGRPSKVEMVHSFKCMSLAESGNEEGGLEVGLIFRRDEEYEDFICVIKQGLEALKS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0705 470 PANTHER - 8 466 - -
Glsi04g0705 470 Pfam Transferase family 15 444 - -
Glsi04g0705 470 Gene3D - 250 467 IPR023213 -
Glsi04g0705 470 Gene3D - 7 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0705 Glsi-ChrGlsi04 4985434 4986846 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0705 26 418 Monolignol Biosynthesis Gene Families AT5G48930 22.850 1.62e-15 76.6