Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0699 ATGGAGTTTGACCTTGAAAACCCTTTAGCAAACTCACACGACCTTCACTCTGACGCTGCCTTTTCTCTCTTTCTCATTGAATCTGACCACTCCCCATCACAAAGTTACTTGCAGAGCTTCAAATCCAGAGATTTCGACATCACTGTTAGAAGAGAAGTCATTTCGTTAATCTCACAGTTGTCCTGCGCCTTTGATCCAGTCCTGTCCTACCTTGCTATCAACTATCTGGATCGGTTCCTTGCCAACCAAGGGATATCGCAACCAAAGCCATGGGTCTTCAAGCTTCTTGCAGTCTCTTGTTTTTCTCTAGCTGCCAAGATGATGAAAACAAAGTTTTCTGTCGCTGATATACAGGCTTTTCTGACACAGGGTGATGGTGGTGTCATTTTTGAAACGCAAACAATACAAAGAATGGAGACCATTATCTTGGGAGCTCTACAATGGCGAATGCGTTCCATCACGCCATTCTCTTTCATTCCATTCTTCATTACTTTGTTCAGGCTCAAACACCCGCCGTGGAGGCAGGTTCTGAAAGATCGAGCAACTGAAATTTTATTCATATCACAAAGGGAGAGAAAGCTTTTGGAATTTAAGCCCTCTATAATTGCTGCAGCAGCCCTTCTGTCTGCATCTCACGAATTGTTTCCCTTACAGTATCCCTGCTTTTTAAGAGCAATATCAGACTGTGCATACGTAAATAAAGAAAGCATATTACAGTGCAATAATGTGATGCAAGACATAGCCATGGAGGAGTACGAGTCTGTGTTCGATATGGTTTCAAGTTCAGAGACAACTATTAATGTGTTAGACCATCATTTTCTGAGCTCAGAAAGCGAAAAAACCAACGGAACCACCACTTCTGCCACTACTCTCAGACAAGAGAAGGATGTGAAGAGAAGGAAAATAACTGGTTATGGTAACAATGACACAGTCCACATTTCTCCGGTTGAACAATGCTGA 960 0.425 MEFDLENPLANSHDLHSDAAFSLFLIESDHSPSQSYLQSFKSRDFDITVRREVISLISQLSCAFDPVLSYLAINYLDRFLANQGISQPKPWVFKLLAVSCFSLAAKMMKTKFSVADIQAFLTQGDGGVIFETQTIQRMETIILGALQWRMRSITPFSFIPFFITLFRLKHPPWRQVLKDRATEILFISQRERKLLEFKPSIIAAAALLSASHELFPLQYPCFLRAISDCAYVNKESILQCNNVMQDIAMEEYESVFDMVSSSETTINVLDHHFLSSESEKTNGTTTSATTLRQEKDVKRRKITGYGNNDTVHISPVEQC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0699 319 Gene3D - 33 151 - -
Glsi04g0699 319 SUPERFAMILY Cyclin-like 135 255 IPR036915 -
Glsi04g0699 319 SUPERFAMILY Cyclin-like 13 150 IPR036915 -
Glsi04g0699 319 SMART Cyclin_C_2 153 278 IPR004367 -
Glsi04g0699 319 Gene3D - 24 241 - -
Glsi04g0699 319 FunFam D6-type cyclin 33 147 - -
Glsi04g0699 319 Pfam Cyclin, C-terminal domain 153 260 IPR004367 -
Glsi04g0699 319 FunFam D6-type cyclin 148 242 - -
Glsi04g0699 319 PANTHER CYCLINS 32 252 IPR039361 -
Glsi04g0699 319 SMART cyclin_7 55 144 IPR013763 -
Glsi04g0699 319 Pfam Cyclin, N-terminal domain 27 150 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0699 Glsi-ChrGlsi04 4940972 4942455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0699 1 299 Core Cell Cycle Gene Families AT4G03270 45.048 9.83e-82 248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1382 14 14559222 14562919 Glsi04g0699 04 4940972 4942455 CCT
Glsi04g0699 04 4940972 4942455 Glsi04g0699 04 4940972 4942455 ECH