Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0696 ATGAGAACCCCTTCCTATGACAAAAGTGGACTGAAGAAAGGTAATTGGACAGCAGAGGAAGATAGGAAGTTAGTTGCATATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGCCTGAAAAGATGTGGAAAGAGTTGCAGACTAAGGTGGTTGAACTATCTGAGGCCAAATATCAAAAGAGGGAACTACACTCCAGATGAAGAAGACATGATTATCGAACTTCACGAAAAGCTGGACTCAATGTCAAACAATGATCATTCTCAAGGCATTCCAGCTGGCTCCTTTTCCCCGCGATCATTTTCGGAGACCGCATCCGCTAGTAACGTAAACTTCCTTCTGGAAGATGACTTTGGTTTTCTGGATTCATACACCACCGGAAACTTCTGGACTGAGCCATATACGGCTAGCGGTGAAATAATGGCAAACAATATTGATGAATCTCTGACTCAAACTACTAACCAGATCCCAGATGAGGATCTTACATCATATGATAAAAGGTTAATGTTGAGGAGGAAGATAAACAAAGAGGTACTGTTGGTGGGATGGAATTTCCCTGAGAATGATTGGGTTAAGCTTGTCCTTGGTTGCCTTTCAACTTTTGTCAGCTTTTATCCTTTTGTGTTGTTGAAAGTGCTATTTGGGTATGCTGCTAACCTGCTACCCTTTGTTGGTTGGGCCTCGCTCACCGGATACAAGGTGCAAGATATGCCCACCGAATGGATGTGGCCCCCAGCACGAATCTCGGGATATGAAGTGCCATTGCCAGGCTCCAGATCTCAGGCCCAAGCATCTAGGCTCGTCCTACGAGAAGCCCATCTAGGTGCACAGGGCCTATCAGAATAA 861 0.4541 MRTPSYDKSGLKKGNWTAEEDRKLVAYVTRYGCWNWRQLPRFAGLKRCGKSCRLRWLNYLRPNIKRGNYTPDEEDMIIELHEKLDSMSNNDHSQGIPAGSFSPRSFSETASASNVNFLLEDDFGFLDSYTTGNFWTEPYTASGEIMANNIDESLTQTTNQIPDEDLTSYDKRLMLRRKINKEVLLVGWNFPENDWVKLVLGCLSTFVSFYPFVLLKVLFGYAANLLPFVGWASLTGYKVQDMPTEWMWPPARISGYEVPLPGSRSQAQASRLVLREAHLGAQGLSE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0696 286 SUPERFAMILY Homeodomain-like 14 86 IPR009057 -
Glsi04g0696 286 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Glsi04g0696 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Glsi04g0696 286 FunFam MYB-related transcription factor 12 65 - -
Glsi04g0696 286 SMART sant 12 62 IPR001005 -
Glsi04g0696 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 84 - -
Glsi04g0696 286 Pfam Myb-like DNA-binding domain 16 75 - -
Glsi04g0696 286 CDD SANT 15 60 IPR001005 -
Glsi04g0696 286 Gene3D - 5 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0696 Glsi-ChrGlsi04 4920622 4927473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0696 2 84 MYB Transcription Factor Family AT1G06180 66.265 2.25e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi04g0696 Myb_DNA-bind_6 1.6e-12 CL0123