Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0695 ATGGTGAGAACCACAACCCCTTCCTGCGACCAAACTGGACTGAACAAGGGCACATGGACACCAGAAGAAGACAGGAAGTTGATGGCTTATGTTACTAGGTACGGCCACTGGAATTGGCGACAACTCCCAAAGTTCGCAGGACTTGCAAGGTGTGGAAAGAGTTGTAGACTGAGGTGGATGAATTATCTGCGGCCAGACATCAAAAGAGGGAATTACACACGAGAAGAAGACGACACTATTATCAGACTCCGCCAAGAGCTGGGTAATAGATGGTCTGCCATTGCTGCTCATTTACCAGGAAGAACAGATAACGAAATAAAAAACCATTGGCACACCACACTCAAGAAGCGCTTTCTCCACGACTCAAAGGATAATAAATCCAGGCAAGACACACAGTCTGCTCCTTCACAATGTGCTTCCGCTAATTCGCAAATCTCCAATACCTGCCCAATGTCCTCTCAGCCATCGTCCAGCGAATTCTCCTGCTTAACTACAGATACTGCTGGTTCCAACTTTAACGAAAATTTGGTTGTGGAGGATGACTTGGCTTTTCTGGGTGCAAATTTTTGGACGGAACCGTTTATGGTTGACATTTCGTACATGCCTAGTGAAGCGCCAATGATACCCTTGGTGACTGAACCTGAATACTTCAGTCCGGTGTGCGATGCAGAACTTCATTGGAGCCAGAATCATTTGCAGGAGGAATGTATTGGCTTACTCTAA 723 0.4633 MVRTTTPSCDQTGLNKGTWTPEEDRKLMAYVTRYGHWNWRQLPKFAGLARCGKSCRLRWMNYLRPDIKRGNYTREEDDTIIRLRQELGNRWSAIAAHLPGRTDNEIKNHWHTTLKKRFLHDSKDNKSRQDTQSAPSQCASANSQISNTCPMSSQPSSSEFSCLTTDTAGSNFNENLVVEDDLAFLGANFWTEPFMVDISYMPSEAPMIPLVTEPEYFSPVCDAELHWSQNHLQEECIGLL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0695 240 MobiDBLite consensus disorder prediction 129 152 - -
Glsi04g0695 240 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Glsi04g0695 240 Gene3D - 71 144 - -
Glsi04g0695 240 MobiDBLite consensus disorder prediction 121 152 - -
Glsi04g0695 240 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Glsi04g0695 240 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Glsi04g0695 240 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Glsi04g0695 240 CDD SANT 71 114 IPR001005 -
Glsi04g0695 240 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 167 - -
Glsi04g0695 240 Gene3D - 16 68 - -
Glsi04g0695 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 63 IPR017930 -
Glsi04g0695 240 CDD SANT 18 63 IPR001005 -
Glsi04g0695 240 FunFam MYB-related transcription factor 15 68 - -
Glsi04g0695 240 SMART sant 15 65 IPR001005 -
Glsi04g0695 240 SMART sant 68 116 IPR001005 -
Glsi04g0695 240 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Glsi04g0695 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0695 Glsi-ChrGlsi04 4909832 4910698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0695 7 204 MYB Transcription Factor Family AT1G06180 50.246 5.12e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi04g0695 Myb_DNA-binding 1.9e-12 CL0123