Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0691 ATGACACTTGTGAAGTCCAAGTCCTCTTTGCAAACTTCAAATGCCGATGTGAAGTTGCAGGGGGAATTAGCTTCCATCCAGGAACTGAAAACATCTGTATTTGAAGTTTGCAGAGAGGACATGAACTTCGTAAGTGTCATACTGACGGTTGTTGGGGGCCGACAGTGGCCTATGATTGCCGCTCACTTACCTGGAAGATCAGATAATGATATCAAGAATCACTGGCACGCCAACCTCAAGAAACGCCTTCCACAAAACTCAGTGCCACATGCAAGTGCTCAAGTTTCCCAGCCAAAAGATCACTTTCCACTCGAATCCGAACAAGAGAGAGATTCAGAGTCAGACGCAAACACTTGCCCTTTCCAAAGTACTCCGACGGAGACCGCAGCTGCCGGTAACGGGATTAATATGCCTCTGGAAGAAGACCACTTTGCTTTTCTAGATGTATACACTCATGACCCTGTAAGCGCAGATTGGACACAGCCTGACGTGACTGACATTTCCTGCTTTCCAAGTGAATTATTCGCACCCTTCGTGACTGAAACAGAAATTTTAAATCCAGTGTACGATGCAAAACTTTGGAATCACTCAGAATAA 597 0.4556 MTLVKSKSSLQTSNADVKLQGELASIQELKTSVFEVCREDMNFVSVILTVVGGRQWPMIAAHLPGRSDNDIKNHWHANLKKRLPQNSVPHASAQVSQPKDHFPLESEQERDSESDANTCPFQSTPTETAAAGNGINMPLEEDHFAFLDVYTHDPVSADWTQPDVTDISCFPSELFAPFVTETEILNPVYDAKLWNHSE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0691 198 Gene3D - 38 112 - -
Glsi04g0691 198 MobiDBLite consensus disorder prediction 88 133 - -
Glsi04g0691 198 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 51 121 - -
Glsi04g0691 198 Pfam Myb-like DNA-binding domain 49 76 IPR001005 -
Glsi04g0691 198 ProSiteProfiles Myb-like domain profile. 39 79 IPR001005 -
Glsi04g0691 198 CDD SANT 39 79 IPR001005 -
Glsi04g0691 198 SUPERFAMILY Homeodomain-like 50 86 IPR009057 -
Glsi04g0691 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 83 IPR017930 -
Glsi04g0691 198 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0691 Glsi-ChrGlsi04 4882014 4885248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0691 53 124 MYB Transcription Factor Family AT1G66230 40.000 1.05e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi04g0691 Myb_DNA-binding 2.3e-05 CL0123