Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0688 ATGGAAGACGACAAACAGGCAGCGGCTTTTTCTTCGAACCCTTCGTTGGCTTTAGTAGGGTATGGCCACTGGAATTGGCGCCAACTCCCCAAGTTTGCAGGTCTTGCAAGGTGTGGAAAGAGCTGCAGATTGAGGTGGATGAATTATCTGAGGCCAAACATCAAAAAAGGGAACTACACTCCACAAGAAGAAGACACAATTATTAAACTCCACGCAAAGCTTGAATCACTGGCACGCCAACCTCAAGAAGCGCCTTCAACAAAACTCAGTGGCACATCAAGTGCTCGAGTTTCCCAGCCAAAAGATCACTCTTCACTTGAATCCAGGCAAGAGAGTGATTCAGAGTCAGACACAAACATTTGCCCTTTCCAAAGTACTCCCATGGAGACCGCAGCTGCCGGTAACGAGATTAATATGCTTCTGGAAGATGATCCCTTTGCTTTTATAGACGAATACACCCATGAGCCTGTAAGTGCGGATTTCTGGACACAGCCTTATGTGGTTGACTTTTCCTGGTTCCCAAGTGAATTACTCGCACCCTTCGTAACTGAACCAGAAACTTTAAGTCCAGTGTATGATGCAAAACTTTGGAATCACTCAGAATAG 606 0.4587 MEDDKQAAAFSSNPSLALVGYGHWNWRQLPKFAGLARCGKSCRLRWMNYLRPNIKKGNYTPQEEDTIIKLHAKLESLARQPQEAPSTKLSGTSSARVSQPKDHSSLESRQESDSESDTNICPFQSTPMETAAAGNEINMLLEDDPFAFIDEYTHEPVSADFWTQPYVVDFSWFPSELLAPFVTEPETLSPVYDAKLWNHSE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0688 201 Pfam Myb-like DNA-binding domain 22 65 - -
Glsi04g0688 201 Gene3D - 2 55 - -
Glsi04g0688 201 ProSiteProfiles Myb-like domain profile. 21 50 IPR001005 -
Glsi04g0688 201 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 74 - -
Glsi04g0688 201 MobiDBLite consensus disorder prediction 80 101 - -
Glsi04g0688 201 SUPERFAMILY Homeodomain-like 20 75 IPR009057 -
Glsi04g0688 201 MobiDBLite consensus disorder prediction 78 125 - -
Glsi04g0688 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 54 IPR017930 -
Glsi04g0688 201 CDD SANT 21 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0688 Glsi-ChrGlsi04 4844453 4846025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0688 21 109 MYB Transcription Factor Family AT2G31180 57.303 9.92e-27 100