Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0686 ATGGAGAACAGGAAGAAACCGTGGTTCTGGCTCTCTGTTCTTGTCCTGTGTTTTTGTTTTCACCTCCATCCCTCCCTTGGAGTTGAAACCATCTCTGCAAATCAAACTCTTTCTGGGGATCAAACTCTCAGCTCTCCCGGTGGGGTCTTCGTATTGGGTTTCTTCAAGCCAGGTAATTCCTCAAACTACTACATAGGAATATGGTATAAAAGGGTCTCTCAACAGACCGTTGTTTGGGTGGCAAACAGAGATAAACCAATCTCTGATAAAAACTCTGCCAAGTTAGTGATATCGGGGGGTAATTTAGTTCTCTTCGATGAGTCTCAAAGGCAAGTTTGGTCTACAAATTTGAATTCCACTACCTCAAGTTCTGTCGTAGCTGTCCTTCTAGATAGTGGGAATCTTGTTGTAAGAGATAAGCCTGATTCATTAGAAAATTTATGGCAAAGTTTTGATAACCCAACAAATACATGGCTTCCGGGTGGTAAAATCATACTGAACAATAAGACAAAAAAACCTCAATATCTCACTTCTTGGAAGAATAACGAGGATCCAGCGACAGGCCTCTTCTCTCTGGAGTTAGACCCACAAGGAACCACTTCATACTTAATTCTTTGGAATAAGTCTGAACAATATTGGACTAGTGGTCCTTGGAATGGGCAAATTTTCAGCCTGGTTCCTGAAATGAGGGCGAATTTTCTATACAATTTCACTTTCGTGTCAAACGAGAACGAGAGCTATTTCACCTACTCCATGTATAATTCTTCTATAATATCTCGGTTTGTGATGGATATCTCGGGGCAGATCCAGCAACTATCGTGGTTGGAAAACACCAAGCAATGGAATTTATTTTGGTCGCAGCCAAGACAACAATGCGAGGTATATGCTTTCTGTGGTTCGTTTGGGAGCTGCACTGAGAATTCCATGCCATTCTGTAATTGCTTGACTGGTTTTAAGCCAAAGTCACAGACTGACTGGGATCTGGGGGATCACTCAGGTGGTTGTGTGAGGAAAACCAAGTTGCAATGTGAGAATTCCAGTCCTTCTAATGGAGATAAGGACAGGTTCCTGGTAATGCCCAATATGGCCTTACCTAAGCATGCACAATCTGTGGGAGTAGGGAATGCAGGGGAATGCGAGTCAACCTGCTTGAACAACTGCTCCTGCTCTGCGTATGCTTATGACAGCAATGGGTGTTCAATTTGGAATGGGGCTCTCTTGAATCTGCAGCAACTTTCTCAAGATGACAGTAGCGGAGAAACTTTATATCTCAAACTTGCAGCTTCCGAGTTTTCTGATCCTAAAAATAATAAGGGGACAATTATCGGTATTGTGGTGGGCTCGGTTTGTGGTATAGGGGCTCTCCTAGCCCTTCTCTTGTTTGTCATGATTAGGCGAAGAAAGAGAATAGTTGGAACAGGAAAAATGGAGGGTTCATTGATGGCATTTGGGTACAGAGATTTGCAAAATGCAACAAAGAATTTCTCTGAAAAATTGGGGGGAGGAGGTTTTGGTTCTGTTTTCAAAGGCACATTGCCTGATTCAAGTGTCATAGCGGTGAAGAAGCTTGAAAGCATTAGCCAAGGTGAGAAGCAGTTCCGATCAGAAGTCAGTACAATTGGGACAGTCCAACATGTTAACCTTGTTCGGCTTCGTGGGTTCTGCTCCGAAGGTGCCAGAAAGCTTCTGGTTTATGATTACATGTCAAATGGCTCTTTGGACGCCCATCTGTTTCAGGAAAAGAAATCCAAGGAATTGGACTGGAAATTAAGATACCAAATTGCTCTGGGAACAGCTAGGGGATTAACTTATCTCCACGAGAAGTGCAGAGACTGCATCATACATTGTGACATAAAGCCCGAAAACATTCTCTTAGATCCTGAATTTTGTCCAAAAGTGGCAGACTTTGGCCTGGCAAAGCTAGTTGGACGAGATTTCAGCAGGGTCCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCCCCGGAGTGGATTTCCGGAGTGGCTATCACAGCCAAAGCTGATGTTTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCAGGTAGGAGGAACTCTGAACCATCTGAAGATGGGAAAGTGAAGTTCTTCCCCACTTGGGCAGCAAACATAGTTGTCCAAGGAGGCGATATCCTTAGCCTGTTAGATCCTACGTTGGAGGGAAATGCTGACATTGAGGAAGTCACTCGAATAATAAAAGTGGCTTCCTGGTCTGTCCAAGATGACGATACTCACCGGCCATCCATGGGTCAGATAGTTCAAATACTTGAAGGGGTGTTGGACGTGAATTTGCCTCCTGTCCCAAGATCCCTCCAATTGTTTGCTGACGACCAGGAGAACATAGTTTTCTTTACTGACTCAAGCTCCAACCAGAGTTCTCAGGTAAGAAGCAACATCTCAACAGCCTCGTCTCAAGCCAAAAGCAACATGTCATCAGCAAGCAACAAGTCCTTGAGAGAAAATTAG 2487 0.4383 MENRKKPWFWLSVLVLCFCFHLHPSLGVETISANQTLSGDQTLSSPGGVFVLGFFKPGNSSNYYIGIWYKRVSQQTVVWVANRDKPISDKNSAKLVISGGNLVLFDESQRQVWSTNLNSTTSSSVVAVLLDSGNLVVRDKPDSLENLWQSFDNPTNTWLPGGKIILNNKTKKPQYLTSWKNNEDPATGLFSLELDPQGTTSYLILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFVSNENESYFTYSMYNSSIISRFVMDISGQIQQLSWLENTKQWNLFWSQPRQQCEVYAFCGSFGSCTENSMPFCNCLTGFKPKSQTDWDLGDHSGGCVRKTKLQCENSSPSNGDKDRFLVMPNMALPKHAQSVGVGNAGECESTCLNNCSCSAYAYDSNGCSIWNGALLNLQQLSQDDSSGETLYLKLAASEFSDPKNNKGTIIGIVVGSVCGIGALLALLLFVMIRRRKRIVGTGKMEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGARKLLVYDYMSNGSLDAHLFQEKKSKELDWKLRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDPEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGKVKFFPTWAANIVVQGGDILSLLDPTLEGNADIEEVTRIIKVASWSVQDDDTHRPSMGQIVQILEGVLDVNLPPVPRSLQLFADDQENIVFFTDSSSNQSSQVRSNISTASSQAKSNMSSASNKSLREN 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0686 828 Gene3D - 27 151 IPR036426 -
Glsi04g0686 828 FunFam Serine/threonine-protein kinase 23 151 - -
Glsi04g0686 828 Pfam PAN-like domain 351 408 IPR003609 -
Glsi04g0686 828 CDD B_lectin 34 154 IPR001480 -
Glsi04g0686 828 PANTHER OS07G0415500 PROTEIN 12 775 - -
Glsi04g0686 828 SMART serkin_6 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0686 828 FunFam Serine/threonine-protein kinase 460 567 - -
Glsi04g0686 828 SMART blect_4 34 154 IPR001480 -
Glsi04g0686 828 Pfam D-mannose binding lectin 76 180 IPR001480 -
Glsi04g0686 828 Pfam Protein kinase domain 496 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0686 828 SUPERFAMILY Protein kinase-like (PK-like) 478 797 IPR011009 -
Glsi04g0686 828 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Glsi04g0686 828 ProSiteProfiles Bulb-type lectin domain profile. 28 150 IPR001480 -
Glsi04g0686 828 PIRSF SRK 4 818 IPR024171 GO:0004674
Glsi04g0686 828 FunFam Serine/threonine-protein kinase 568 771 - -
Glsi04g0686 828 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Glsi04g0686 828 ProSiteProfiles Protein kinase domain profile. 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0686 828 ProSiteProfiles PAN/Apple domain profile. 343 427 IPR003609 -
Glsi04g0686 828 MobiDBLite consensus disorder prediction 792 828 - -
Glsi04g0686 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 219 IPR036426 -
Glsi04g0686 828 CDD STKc_IRAK 499 765 - -
Glsi04g0686 828 Gene3D Transferase(Phosphotransferase) domain 1 568 771 - -
Glsi04g0686 828 SMART ntp_6 351 426 IPR003609 -
Glsi04g0686 828 SUPERFAMILY Hairpin loop containing domain-like 352 403 - -
Glsi04g0686 828 Gene3D Phosphorylase Kinase; domain 1 461 567 - -
Glsi04g0686 828 CDD PAN_AP_plant 339 427 - -
Glsi04g0686 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0686 Glsi-ChrGlsi04 4828915 4831401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0686 452 773 Receptor kinase-like Gene Family AT5G20050 41.620 3.23e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi04g0686 Pkinase 2.9e-46 CL0016