Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0683 ATGAAGAACTGCGAGTTGTGCAAGTTTCCGGCGACGACCTACTGCGAGTCTGACCAGGCCAGCTTGTGCTGGGACTGCGACGCTAGGGTTCACGGAGCCAACTTCTTGGTAGCCAGGCACTCCAGGACTCTTCTATGCCAAGCGTGCCAGTCTCCGACGCCATGGAAAGCCTCCGGTGCTGTGCTCGGAAACACTGTTTCGGTGTGTCGGAATTGTGACGGCGGAACGAACTGTAACGGCGAAGAGGGCGAAGAGAGCGAAGGAGGCAATGACAACGAGATAGACACAGAAGACGATCTCGATGACGACGATGACATTCTCGGCGAAGATGACGGCGACGATGACGTAGGCGGTGAAATGGACGGAGGTAATCAAGTAGTTCCTTCGTCCTCCACGACGCCGCCACCGGCTCTAAGTTCTTCCAGTAGCGATGAGTCAGTTTCCAGGCCTAATAACGGCAATAGAGATGTTTCCGAAACAGTAACCACAATTTCCTTAAAACGAAGGCGTGCGGATGAATCCGATCATGATTTTCAGGACGGTGCGAGTTCAACCGACGTACGGTGA 567 0.5397 MKNCELCKFPATTYCESDQASLCWDCDARVHGANFLVARHSRTLLCQACQSPTPWKASGAVLGNTVSVCRNCDGGTNCNGEEGEESEGGNDNEIDTEDDLDDDDDILGEDDGDDDVGGEMDGGNQVVPSSSTTPPPALSSSSSDESVSRPNNGNRDVSETVTTISLKRRRADESDHDFQDGASSTDVR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0683 188 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 174 - -
Glsi04g0683 188 MobiDBLite consensus disorder prediction 84 118 - -
Glsi04g0683 188 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Glsi04g0683 188 CDD Bbox1_BBX-like 4 45 - -
Glsi04g0683 188 MobiDBLite consensus disorder prediction 124 161 - -
Glsi04g0683 188 Pfam B-box zinc finger 2 40 IPR000315 GO:0008270
Glsi04g0683 188 MobiDBLite consensus disorder prediction 162 188 - -
Glsi04g0683 188 MobiDBLite consensus disorder prediction 79 188 - -
Glsi04g0683 188 SMART bboxneu5 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0683 Glsi-ChrGlsi04 4811247 4811932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0683 2 113 C2C2-CO-like Transcription Factor Family AT4G27310 53.509 9.51e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi04g0683 zf-B_box 7.6e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1392 14 14619443 14620383 Glsi04g0683 04 4811247 4811932 CCT
Glsi04g0683 04 4811247 4811932 Glsi04g0683 04 4811247 4811932 ECH