Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0674 ATGGTGAACACAAGGAGAAAGACCAGAACGATAGTAATCCTCAACTGGTCTGCAAATCACATGTTGCTGTCTGTCTTCTTCTTACACGCATTATTTTTCACTTTCATGCATTGCTCTGCTAGGGATACCATAACTACTAACAACTTCATAAGTGATGGGAGAGGACATACTCTTATTTCAGCGGGAGAAGTATTTGAACTAGGATTCTTTACTCCTAATGGAAGCTCTAGTCGCAGAAGATATGTGGGAATATGGTACTACAGGTCAAATCCACCAGCAGTTGTGTGGGTTGCCAACCGAGATAATCCACTTTCTGATGCTGGGGGTGTTTTTGCCATTGCAGAGGATGGCAATCTCAGGGTTCTGGATGGAAATGGGAGATCTTACTGGGGTACAAATCTTGAAACATCGTCTTCAATGCACAGGACAGTGAAGCTAATGGATAGTGGGAATCTCGTTGTAAGCGATGAAGAACGAGGAAATCACTCAGTAAAGATTCTCTGGCAGAGTTTTGTGAATCCCACAGATACATTTCTTCCTGGCATGAAAATGGATGAAAATCTGGTATTGACTTCATGGAGAAGTTATGATGACCCAGCACCTGGGAACTTCTCATTTCGGCAAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCTGTCAGGTACTGGAAAAGCAGTATCGCAGGTGCATTTTTTGGGTCAGGTGAAATGTCTTCAGCAATCTCTTACTTACTGTCGAATTTCACCTTGAGAATATCCCCAAACAACTCTGTACCCTTTCTCACTTCATCACTATATGGTGACACAAGGCTGGTTATGACATACTCGGGTCAACTTCAGTATATGAAGTTGGATTCACAGAAAATTTGGTCCTTAGTTTGGGCAGAGCCCAGAGATAGATGCAGTGTGTATAATGCTTGTGGTAACTTTGGCAGCTGTAATAGTAAGTATGATTCTATGTGCAAGTGTTTGCCTGGGTTCAAGCCTAACTCTCCGGGAAGTTGGAATTCCGGTGACTTTTCAGGTGGATGCAGCAGGAAAACAACTGTGTGCAGCGAGAATGCCAATAGTGACACGTTTTTGAGTTTGAAAATGATGAAAGTTGGGAGCCCAGATGCTCGGTTTGATGCAAAGAATGAAATGGAATGCAAGTTAGAGTGCCTTAATAATTGTCAATGCTATGCGTATTCTTATGAAGACCCTAAAATTACAAGGCGGGGTGCTAGTGGTGATGCAGTGTGCTGGATTTGGTCTGAGGACCTCAACAATCTTGAAGAAGAATATGAGAATGGCTGTGATCTTCATGTACGTGTGGCATTTTCTGATATAGAATCCACTGGGAGGAATTGTGGGACTTGTGGTACAAACTTCATACCATATCCACTCAGCACAGGACAAAATTGTGGTGACCCCATGTACTTCAGTTTTCGCTGCAACAATACCTCAGGCGAGCTTAATTTTGAGACTCCTGGGGGAACTTATCAAGTGATAAGCATAACTCCTGAAACACAGAAATTCATGATCCACAGCAGAGACGCAAATGATTGTGAGGGTCAAAATTCAAGGGACAAGCTTCTGCGTCTGAACCAGTCATCTCCATTTCATCTTACTGGCAGGTGCAATGCAGACCCAAGCACCTTTAACCCTGTTGCTCCCGTGAAAGTTGGCGAGGAAATAGAATTACGCTGGGATCCACCATTAGAGCCGGTTTGTTCATCACCTTTAGACTGCAAGGACTGGCCAAATTCTATTTGCAACACAACCAGAGATGGGAAAAAGACGTGCCTTTGCAATACAAATTTTCTTTGGGATGGCTTGAATTTAAATTGTACCATAGAAGGCAGTCATAGCTATCAAACAGAAAACCATCTATCCTCTCCTCAGATTATTGCAGTCACTTTCACAACTGTGATTGTGTTAATTCTTCTGTCAAGTACTGTAACCTATGTTTACTTTTGGAGAAGGAGGCTGGCCAAAACCCAAGAAAGCAGGGGATATATTCAGAAAAATTCAGCCATTAACTTGTATGACAGTGAGAGATATGTCAAAGATTTGATTGAATCGGGTAGGCTCAAAGAAAATGATGCACAGGCCATAGATATCCCACATTTTCATTTGGAAAGCATACTTGATGCTACTAATAACTTTTCAAATGCAAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTCTACAAGGGAAAGTTTCCAGGTGGACAAGAGATAGCAGTAAAGAGACTCTCAAGTTGTTCTGGACAAGGTTTAGAGGAGTTTAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATCGGAACCTGGTTAGGCTTCTGGGTTATTGTGTTCAAGGAGATGAAAAGATGTTAGTGTATGAATATATGCCAAATAGAAGCCTAGATTCTTTCATATTTGGTAAGCTCTGTGTTCTATTAGATTGGGACATGCGCTTCAAGATTATTTTAGGGATTGCTCGAGGCCTCCTTTACCTTCATCAAGATTCAAGATTGAGGATTATTCATAGAGACTTAAAAACAAGTAATATTTTACTTGATGAAGAGATGAACCCTAAAATCTCAGACTTTGGCTTAGCTAGGATATTTGGAGGAAAAGAAACAGCAGCAAACACAAACAGAGTGGTTGGAACTTATGGGTATATGTCTCCAGAGTATGCATTAGATGGATTTTTTTCAGTCAAGTCTGATGTATTTAGCTTTGGTGTGGTGGTACTTGAAATTATTAGTGGAAAAAGGAACACAGGATTTTACCAGACAGAACATGGTTTAAGTCTTCTAGGCTATGCATGGCAGTTATGGAAAGTAGACAGGGCATTGGATTTTATGGATCAGACACTATCTCAAACATGCAATGCAGATGAATATTTGAAGTGTGTAAATGTTGGGCTCTTATGCGTACAAGAAGATCCAAATGAACGTCCCATAATGTCGAATGTAGTTTTCATGCTTGGAAGTGATTCCAGTACTCTTCCAGCTCCCAAGCAGCCAGCCTTCATTGTTAGGAGATGCCCTTCTAGCAGGGCTTCTACTACCAGTAAACTGGAAACTTGTTCACAAAATGAATTGACAGTCACTTTAGAAAACGGCAGATACGTAGTATCTTCTGCAAATGTGGAGAACAAATGCAAGGATGCCTTGTTATCTCGTAGATTTGATGACAAAAGAAAATGA 3186 0.4109 MVNTRRKTRTIVILNWSANHMLLSVFFLHALFFTFMHCSARDTITTNNFISDGRGHTLISAGEVFELGFFTPNGSSSRRRYVGIWYYRSNPPAVVWVANRDNPLSDAGGVFAIAEDGNLRVLDGNGRSYWGTNLETSSSMHRTVKLMDSGNLVVSDEERGNHSVKILWQSFVNPTDTFLPGMKMDENLVLTSWRSYDDPAPGNFSFRQDQGENQYIIWKRSVRYWKSSIAGAFFGSGEMSSAISYLLSNFTLRISPNNSVPFLTSSLYGDTRLVMTYSGQLQYMKLDSQKIWSLVWAEPRDRCSVYNACGNFGSCNSKYDSMCKCLPGFKPNSPGSWNSGDFSGGCSRKTTVCSENANSDTFLSLKMMKVGSPDARFDAKNEMECKLECLNNCQCYAYSYEDPKITRRGASGDAVCWIWSEDLNNLEEEYENGCDLHVRVAFSDIESTGRNCGTCGTNFIPYPLSTGQNCGDPMYFSFRCNNTSGELNFETPGGTYQVISITPETQKFMIHSRDANDCEGQNSRDKLLRLNQSSPFHLTGRCNADPSTFNPVAPVKVGEEIELRWDPPLEPVCSSPLDCKDWPNSICNTTRDGKKTCLCNTNFLWDGLNLNCTIEGSHSYQTENHLSSPQIIAVTFTTVIVLILLSSTVTYVYFWRRRLAKTQESRGYIQKNSAINLYDSERYVKDLIESGRLKENDAQAIDIPHFHLESILDATNNFSNANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVQGDEKMLVYEYMPNRSLDSFIFGKLCVLLDWDMRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETAANTNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYQTEHGLSLLGYAWQLWKVDRALDFMDQTLSQTCNADEYLKCVNVGLLCVQEDPNERPIMSNVVFMLGSDSSTLPAPKQPAFIVRRCPSSRASTTSKLETCSQNELTVTLENGRYVVSSANVENKCKDALLSRRFDDKRK 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0674 1061 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 36 171 - -
Glsi04g0674 1061 Pfam PAN-like domain 356 425 IPR003609 -
Glsi04g0674 1061 SMART blect_4 47 174 IPR001480 -
Glsi04g0674 1061 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Glsi04g0674 1061 CDD B_lectin 47 174 IPR001480 -
Glsi04g0674 1061 CDD STKc_IRAK 724 988 - -
Glsi04g0674 1061 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 199 IPR036426 -
Glsi04g0674 1061 CDD PAN_AP_plant 353 441 - -
Glsi04g0674 1061 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 683 793 - -
Glsi04g0674 1061 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 975 - -
Glsi04g0674 1061 ProSiteProfiles Bulb-type lectin domain profile. 41 167 IPR001480 -
Glsi04g0674 1061 Gene3D Transferase(Phosphotransferase) domain 1 794 996 - -
Glsi04g0674 1061 ProSiteProfiles Protein kinase domain profile. 718 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0674 1061 ProSiteProfiles PAN/Apple domain profile. 353 434 IPR003609 -
Glsi04g0674 1061 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 794 996 - -
Glsi04g0674 1061 Pfam S-locus glycoprotein domain 232 332 IPR000858 GO:0048544
Glsi04g0674 1061 SMART ntp_6 357 440 IPR003609 -
Glsi04g0674 1061 Gene3D - 35 174 IPR036426 -
Glsi04g0674 1061 Pfam D-mannose binding lectin 94 189 IPR001480 -
Glsi04g0674 1061 SUPERFAMILY Protein kinase-like (PK-like) 701 988 IPR011009 -
Glsi04g0674 1061 Pfam Domain of unknown function (DUF3403) 990 1035 IPR021820 GO:0004674
Glsi04g0674 1061 ProSiteProfiles EGF-like domain profile. 299 335 IPR000742 -
Glsi04g0674 1061 Pfam Protein tyrosine and serine/threonine kinase 721 986 IPR001245 GO:0004672|GO:0006468
Glsi04g0674 1061 Gene3D Phosphorylase Kinase; domain 1 681 793 - -
Glsi04g0674 1061 SMART serkin_6 718 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0674 Glsi-ChrGlsi04 4674630 4679357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0674 711 1006 Receptor kinase-like Gene Family AT4G23230 62.626 3.27e-124 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi04g0674 PK_Tyr_Ser-Thr 9.1e-46 CL0016