Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0661 ATGAAAACTGAGTTAAAGGGAAGCACTACTTCCATCCCCCTGCAATACGCAACTCTCTTTAACGCACCCCACAGTCCTGACCTTTCAGGAGCACTTAAAGGGTGTCTTGGAAGCCTTGATGGAGCTTGTATTGAGAAGCTCTTACTCCACTGTGCCAGCGCTTTAGAGGGCAACGATGTGACTTTGGCTCAACAAGTCATGTGGGTGCTCAATAACGTTGCTTCTCCTGTTGGTGACACTAACCAGAGGCTCACCTCATGGTTCCTCAGGGCTTTAATCTCTAAGGCTTCAAGAGTTTGCCCAGCAGCGATGAACTTCAATGGAAGCAGTAACATTCAGAGAAGGTTGATGTCCGTGACAGAGTTAGCTGGGTATGTTGATCTAATTCCTTGGCATAGGTTTGGGTTTTGTGCTTCCAATAGTGCTATTTTCAAAGCAATTGATGGGTTCCAAAGGGTGCATATACTAGATTTTAGTATCACTCATTGTATGCAGTGGCCTACTCTTATAGATGCCTTGGCTAAAAGGCCAGAAGGACCTCCTTCACTTAAAATCACAGTGCCTTCTTGCAGGCCACATGTCCCTCCCTTGGTCAATATATCAACAGAAGAAGTTGGGCTACGTTTGGGAAATTTTGCTAAGCTCAGGGATGTCCTTTTTGAATTCAATGTAATTGAAAATAGTATTACACCTTCATTAACGACATCTGCTGAGTTAAGCAATGAATCATTTAACTTTCACTTTGAATTACTGTTAAGTCTCTTGAATCCCACTACGTTAAATCTTAGGGAAGATGAGGCTTTGGTAATAAATTGCCAACATTGGCTACGCTACTTGTCTGATGATCGAAAGGGGAGCCTCCATAATGCTTCTCCTAGAGATACTTTTCTAAATGTGATTAAGGGTCTGAACCCCAGAATAGTACTCTTGGTTGATGAGGACTGTGATCTCAGTGCACCAAATCTCACATCAAGGATCACCACTTGTTTCAACTATCTATGGATTCCCTTTGATGCATTGGAAACCTTTTTGCCTAAAGATAGTTGCCAGAGGGTAGGGTATGAATCTGACATAGGCCAGAAAATTGAAAACATCATTAGCTTTGAGGGGGTTCAAAGAATAGAGAGACAGGAAAGCGGGGCAAAAATGTCACAAAGAATGAAAAATGCAGGGTTCTTCAGCGTTCCATTTTGGGATGAAACTGTTAGTGAAGTTAAGGCTTTGCTTGATGAACATGCTAGTGGATGGGGGATGAAGCGAGAAGAAGATATGTTAGTTCTCACATGGAAAGGTCACAATTCTGTCTTTGCCACAGCTTGGGTGCCCAGTGAAATAAAGGATCATATGGGTGTGGATTGA 1359 0.4268 MKTELKGSTTSIPLQYATLFNAPHSPDLSGALKGCLGSLDGACIEKLLLHCASALEGNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISKASRVCPAAMNFNGSSNIQRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIDGFQRVHILDFSITHCMQWPTLIDALAKRPEGPPSLKITVPSCRPHVPPLVNISTEEVGLRLGNFAKLRDVLFEFNVIENSITPSLTTSAELSNESFNFHFELLLSLLNPTTLNLREDEALVINCQHWLRYLSDDRKGSLHNASPRDTFLNVIKGLNPRIVLLVDEDCDLSAPNLTSRITTCFNYLWIPFDALETFLPKDSCQRVGYESDIGQKIENIISFEGVQRIERQESGAKMSQRMKNAGFFSVPFWDETVSEVKALLDEHASGWGMKREEDMLVLTWKGHNSVFATAWVPSEIKDHMGVD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0661 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 430 IPR005202 -
Glsi04g0661 452 ProSiteProfiles GRAS family profile. 35 441 IPR005202 -
Glsi04g0661 452 Pfam GRAS domain family 45 227 IPR005202 -
Glsi04g0661 452 Pfam GRAS domain family 232 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0661 Glsi-ChrGlsi04 4552272 4553630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0661 32 442 GRAS Transcription Factor Family AT3G49950 47.255 6.25e-126 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi04g0661 GRAS 5e-43 CL0063