Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0659 ATGGGCGATGGAGGCGTCGCATGCATGCCTTTGCAGCAGCAGCAGCAGCATATCATGGAGAGGTTGTCAAATGCAGAAAAGTCGCTTTGCGGAGGCAAGAATGGGAATGCGTTCAATTCCAAGTTGTTCAAATTGGCTGACAGTGAGCGAAAGAAGAAGATGAAGGCGAAGAAAGAGGAGCCGGCAAAGAAGGCTGAAGTGGAAAAATGTGAGTTGGTATTGGACAGAGTGACCAAGAGCAACAACGAAACTGAGAATGGTGAAATCTATGGAGATAAAGTGCAAAAAGAAGATGTGGAAGAGGGTGAATTGGGCACGTTGAAGTGGCCAAGGGGTGACCTGGAAATTGGAGAATTTGTGCCAGACAAGCCTCGGAGAAGTGAAATTGAGAATGGAGAGATTGTCAATGAGAAATGGAAAAAAAGGGAGCTGGAGAAGGGAGGCATTGTTTCTGGAAAATGGAGAAAAGAGAATGTTGAGAAAGGGGAAATAGTTCCGGAGAAGGGTAGGAAAAGAGAAGCTGAGAAAGGGGTGTATAGGCCATGGAGAGGTATAAAGGATGACATTGAGAGGGGAGAATTCATTCCTGATAGATGGCATAGAGAAGTGGGAAAGGATGATTATGGTTACAGTAGAACGCGCAGGTACCAGTTTGGTAAGGACAAGGGGTCGAAAAGTGAACGTGAACGTACACCACCTTCGGGGAGATATAATTGTGATGATTTAATTAGAAAGAAAGAATCTAATAGAAGTGGAGGTCAGCATGCCAAGAGTGCTCCTAGGTGGGAGAGTGGACAAGAGAGGAAAATAAGGATCAGCTCAAAGATTGTGGATGAGGAAAAAAATGAACAAAGCAATGGTAGGAATCATGCACAGGATTACTCTTCTGGAAGCCGCTTGAAGCGACATGGGAATGATTCAGACAGCAGTGAGCGCAAGAATTATGGAGATTATGCTGGTTTAAAAAGTCGAAGGCTTTCTGATGATACCTGTCGCTCTGTATATTCAGAGCACTATTCTCGTTGTTCTGTGGAAAGGTCTTATAGAAATTCTTCTTCTTCCTCAAGAACATCAGTGGACAAGTATTCTAGGCATCATGAATCTTCTTTGTTTACCCGATCAACTTATGATAGGCATGGTCGAAGCCCTGTTCATTCTGAGCGATCCTCACATGATCGAGGTAGATATTATGACCATAGAGATCATACCCCAGTGCGTCGTGAGAGATCCCCCTATGGTCGTGACAAATCTCCATATAGCCGGGAGAAATCTCCTCTTGGTCATGAGAAATCTCCATATAGGAATTGGGACAGGAGCCGCAAAATAACGAGTCCTACTCATGCTGAGCTGTCTCCACCAGATCGAGGCAAACACAATGGCCGCAGGGATCGTACACCAAATTTATTAGAGCCATCCCCTCTTGATCAAATTAAGCAAAATAGTCATAGAGAAATAAGTTGTAAAATCCAATCAAGTGAAAATAATAACTCAGAAGATAGTTGTAAGGAGCTTGAAGATAAAAACATCCAAAGGGAGTCAAATTGTTCAGTTACAGAATCTGAAGGAGAAAGAAATGCCCATGGTACTAATGGGTCTATTGAGAAAAATGTCTGCAGTGAACCTGAGAAGGAACAGCCATCCTGCGGCCCATCTTTACGCTGCAAAGATTCTCCTTGCTTTGAGCCACTTCCTGAGGAGCTGCCTTCTATGGAAGAAGATATGGACATATGTGATACCCCTCCTCATGACCTTGTGGTGGCAGATACATTGCCAGGGAAATGGTTTTACCTTGATTATAGTGGTGTAGAACAAGGGCCTTCTAAATTGTGTGAGATCAGGGCCCTCGTTGATGAAGGGGTACTAATGTCAGATCACTTCATCAAGCACTTAGATAGTGACAGATGGTTAACTGTCGAAAATGCAGCATCACCATTGGCAGCTCAGAGTTTTCCATCCATTGTATCAGACACCATAACTAAGCTGGTAAGCCCTCCAGAAGCTCCTGGTAATCTTTTGGCTGATATTGGTGATATCCTTCAATCTGGTCCTGAGAATTATCAGGAAATGCCAGACCCTTTGCTGCAGCCAATGGTATGCCCTGATGACATTGTGGTAGCATCTGAACTAGAAGACCTGCACATTGATGAAAGGGTTGGAGCTCTTTTAAAGAGTTATGATGTCACCCCTGGGATGGAGCTCGAGGCAATAAAAGAAGCTTTGCAAATGAATTTTGAATATGCAAAATGGCAGGGGTTGGGAGTCTGTGAAGGTTTTTCTTGGCATGATGCTTTCCTGAATGAAGAGTGTGATTCAAGAAATGATTTAGCATCAAGAGATTCTGAGCCTCATTTAAGTATTGTCTCTGACAAGGATGATGGCTTTGCCTTTGGTATTTCTGGCGACTGGTTTTCTGCCAGATGGTCATGCAAAGGTGGTGACTGGAAGTGGAATGATGATGTCCAAGATAGATTTTCTAGGAAGAAACTTGTCCTAAATGATGGGTTTCCATTATGTCAAATGTCAAAGTCGGGGTGTGAAGATCCTCGCTGGCCTCAAAAAGATAACTTGTATTATCCTTCTCACAGCATGAGGCTTGATCTCCCTCTTTGGGCTTTTTGTGCTGATGAGAGGATTGATTGCAGTGCTATGAGCAGACCAATTCAAAGTAAGCCTGCTTTTGTTAGAGGAGTGAAAGGAAATGTTCTTCCAGTGGTCAGGATAAATGCATGTGTGGTTAAGGACCAGGAATCATTGGTCTCTGAGCCACATCATAAAATCCGAGGCAAGGATAGGCATCCATCAAGGTCAAGTCATCCTGTCTCTTCAACTGTTGATAACAAGAGATCATCAACTGAAGAAGATTCTCAGTCAAAAGCAGTTAATGATCAAGGTTCATGCAGCAGCATGGAATTTATTAAAATCCCTAAAGATCGTCTCCACACTGTTCATGACTTGCAGGTCCATTTGGGTGACTGGTATTATCTTGATGGCTCTGGGCGTGAAAGAGGACCTTCATCATTTTCAGAGCTGCAGGTTTTAGTAGATCAAGGAATTATAAAAAAGTACAGCAGTGTTTTCAGGAAAAGTGATAAACTATGGGTTCCTGTTACATCTACTTCAGAAACTTCTGAGGTCAGTCTCAGGGTCCACCAGGAAAGTAGTTCAATGTCTGGTGAATGTTCAGGACTTCAGTTGTCGCAAACCCAAAGTGTTTCATTCAGTGACCCTTGCTCAAATTCCAGTTTGTTTAACAGCATACACTCTCAGTTTGTTGGTTACACCCGTGGGAAGCTACATGAATTGGTAATGAAATCATATAAGAGTCGGGAGTTTGCTGCAGCTATAAATGAGGTTTTGGATCCCTGGATCAATGCAAGACAGCCAAAGCAAGAAATAGATAAACAAATATATAAGAAATCAGAAGTTGATCCACGTGCTTCCAAGAGATCCCGAATTTTAGTTAACCATATTGAAGAGGACAGTGAAATGGAAGATGGTAGCCTCTCTATCCAGAAGGATGAATCCACTTTTGAGGATCTATGTGGTGATGCTACTTTCTTTGGAGAAAAAAGTGGTATTGTTGATTCTGATATGGGAAGCTGGGGCCTATTGAATGGTCGTATTTTGGCACGAATTTTTCATTTTTTGAGACCTGATTTGAAATCCCTTGTCTTTGCTTCAATGACTTGTAAGCATTGGAGAGCTTCTTTCAGGTTTTACAAGGAAGTTTCAAGGCAGGTCAATTTGTCATCCTTTGGTCTTTCTTGCACTGATTCCATGTTGTGGAACATTATGAATGGTTATGAGAAAGACAAGATCAGATCTATGATTCTAATGGGTTGCACCAATATTACTGCTGACATGCTTGAGAAGATTCTTATTTCATTTCCTTGTCTATCTACAATAGACATTAGAGGGTGCAACCAATTTGGAGAGTTGACTCCTAAATTTTCAAATGTGAAATGGATCAAGAGCCAAAGTTCACGCATAACCAAAATCACAGAGGAGCCATATAAAATCAGGACCCTTAAATCGATCAGTGAGCAAACTTCATCTGTTTCCAAAAACAGCAGTCTTGGTACTATGGACGACTTTGGTGAACTAAAGGAGTATTTTAATAGTGTGGATAAGAGAGACACATCAAAGCAATTATTCCGTCAAAACTTATACAAACGGTCAAAACTATATGATGCGAGAAGGTCCTCTTCCATTCTATCTAGAGATGCTCGTACAAGACGATGGGCCATTAAGAAATCTGAAAATGGTTACAAGAGGATGGAGGAATTTCTTTCTTCAAGTCTGAGGGAAATTATGAAGGCAAACTCCTGTGATTTTTTTGCGCCCAAGGTTGCGGAGATTGAGGCTAAAATGAAAATTGGCTATTACAGTGGCCGTGGGTTTAGCTCTCTCAAGGAGGACATCAGTAGAATGTGCCGTGATGCAATAAAAGCAAAGAATCGGGGTGAAGCTGGTGATATGAACCATGTTATCACGCTATTCATTCAGCTTGCAACACGGTTGGAAAAGAATTCCAAGTCTGCTCAAGACAGAGATGCACTATGGAAGTCATGGGAAAATGAAAGTTCTTCTACTTCCTCAAAGTATAAGAAGAATAGAATGGTGACTGAGAGGAAGTATAGGAGTAATGGAGCACAAGGTGGTTTGGATAATGAAGAGTATGCCTCTGAACGAGAAATTAGGAGGCGTTTATCGAAATTGAATAAGCAATCCATGGGCTCGGAAAGTGAAACATCTGATGAACTTGATAGGTCTTCTGTAGATGGTAACAGTAACAGTGAGACTACAATCTCAGACACTGGAAGTGACCAAGAAGTCCATTCAGAAAGTCGAACTGCGGAGTTAAAGGGAGATGGATACTTCACTCCTGGTGAAGGGTTGGATTACATAACTGATGACCGTGAATGGGGTGCTCGCATGACAAAAGCAAGTCTGGCTCCTCCTGTTACTCGGAAATATGAAGTCATTGATCACTATGTCATTGTAGCTGATGAAGAGGATGTGCGAAGGAAGATGCAAGTTTCGTTGCCAGATGATTATGCAGAGAAGCTGAATGCACAAAAGAATGGTACTGAGGAGTCAGATATGGAACTTCCTGAAGTCAAGGATTACAAACCTAGAAAAAAGCTAGGAGATGAGGTTATTGAGCAAGAAGTTTATGGAATCGATCCCTATACACACAATCTTTTACTTGATTCTATGCCTGTGGAGCTAGATTGGCCTCTACAGGAAAAACATATGTTTATAGAAGATATGCTCCTTCGGACTTTAAATAAGAAAGCTAGCCATTTTACTGGAACTGGAAATACCCCAATGAGCTACCCTTTGCGGCCTGTTATTGAAGAAATTAAAAGATGTGCTGAGGAGGAATGTGATACAAGGACCATTAGAATGTGTCAAGGTATTTTAAAGGCCATAAACAGCCGTCCGGATGACAAATATGTTGCCTATAGAAAGGGGCTAGGTGTTGTTTGCAACAAAGAAGGTGGCTTTGGTGAAGATGATTTTGTTGTGGAGTTTCTGGGTGAGGTCTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCCCTGCAGAAAAATAGTACAGATCCAGCTCCAGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCAGATGGGTATGACTTAGTTGTTGTCGATGCCATGCATAAGGCGAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTTGATGGTCATTATTTGATTGGAATTTATACTCTTCGTAAAATTCAACATGGTGAGGAGATTACTTTCGATTATAATTCAGTCACAGAGAGCAAGGAGGAATATGAGGCATCGGTTTGTTTGTGTGGAAGCCAAGTTTGCCGAGGGAGCTATTTGAATCTGACTGGTGAAGGGGCTTTTCAAAAGGTACTGAAGGAGTCGCATGGAATTCTTCATCGTCACTATTTGATGCTAGAAGCTTGTGAACTAAACTCCGTTTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTCTAGGTAGTTGTTTGCTTGGTGGCCTGCCAGATTGGCTAGTTGCATATGCAGCTCGCCTGGTGAGGTTCATCAATTTTGAAAGAATTAAACTTCCTGAGGAAATTTTAAGGCATAATTTGGACGAAAAAAGAAAATATTTTTCGGATATATGTCTTGAAGTTGAGAGGAGTGATGCCGAGGTTCAGGCTGAGGGTGTATACAATCAAAGGCTTCAGAACCTTGCTGTCACTCTTGACAAGGTAAGATATGTTATGAGATGTGTTTTTGGTGATCCACGAAGAGCACCACCCCCTCTTGAGAAGCTGAGTCCTGAAGCAGCTGTTTCTGTCCTCTGGAAAGGAGAGGGTTCATTTGTTGAAGAGCTTCTTCAGTGCATGGCTCCTCATGTGGAAGAAGACACCTTGAATGATCTCAAGTCCAAAATTTATGCCCATGATCCTTCAGGTTCTAGAGATATTCAAAAAGAGCTTCAGAAATCTCTACTTTGGTTGAGGGATGAGGTCCGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCATATACCAAGTGCTTCTTTAGAATACAGGGTTATGAAACTACTACTTCTCCACCTGTCTATATTAGTCCGCTTGATTTAGGTCCCAAGTACACTGATAAGTTGGGAGCAGGATTTCAGGAGTACCGTAAGACATATGGTGAAAATTATTGTTTAGGGCAGCTGATTTTTTGGCATAATCAAAGTAATGCAGAGCCAGATTGTAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTTATTGCCAGATATTGGTTCCTTTTATGCCAAGGTTCAGAAGCCTTCACGGCATCGTGTTTATGGTCCGAGGACTGTCAGATCTATGCTGGCCAGAATGGAGAAGCAGCCCCAGAGACCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTCTCCCAATTTTTTTGGCAGCCCAATGTTAGATGCTGTAATAAATAGCACTCCACTGGATGGGGAAATGGTTCGATGGTTGAAGCAGAGACCTACCATATTCCAGGCCATGTGGGACCAGTGA 7140 0.4225 MGDGGVACMPLQQQQQHIMERLSNAEKSLCGGKNGNAFNSKLFKLADSERKKKMKAKKEEPAKKAEVEKCELVLDRVTKSNNETENGEIYGDKVQKEDVEEGELGTLKWPRGDLEIGEFVPDKPRRSEIENGEIVNEKWKKRELEKGGIVSGKWRKENVEKGEIVPEKGRKREAEKGVYRPWRGIKDDIERGEFIPDRWHREVGKDDYGYSRTRRYQFGKDKGSKSERERTPPSGRYNCDDLIRKKESNRSGGQHAKSAPRWESGQERKIRISSKIVDEEKNEQSNGRNHAQDYSSGSRLKRHGNDSDSSERKNYGDYAGLKSRRLSDDTCRSVYSEHYSRCSVERSYRNSSSSSRTSVDKYSRHHESSLFTRSTYDRHGRSPVHSERSSHDRGRYYDHRDHTPVRRERSPYGRDKSPYSREKSPLGHEKSPYRNWDRSRKITSPTHAELSPPDRGKHNGRRDRTPNLLEPSPLDQIKQNSHREISCKIQSSENNNSEDSCKELEDKNIQRESNCSVTESEGERNAHGTNGSIEKNVCSEPEKEQPSCGPSLRCKDSPCFEPLPEELPSMEEDMDICDTPPHDLVVADTLPGKWFYLDYSGVEQGPSKLCEIRALVDEGVLMSDHFIKHLDSDRWLTVENAASPLAAQSFPSIVSDTITKLVSPPEAPGNLLADIGDILQSGPENYQEMPDPLLQPMVCPDDIVVASELEDLHIDERVGALLKSYDVTPGMELEAIKEALQMNFEYAKWQGLGVCEGFSWHDAFLNEECDSRNDLASRDSEPHLSIVSDKDDGFAFGISGDWFSARWSCKGGDWKWNDDVQDRFSRKKLVLNDGFPLCQMSKSGCEDPRWPQKDNLYYPSHSMRLDLPLWAFCADERIDCSAMSRPIQSKPAFVRGVKGNVLPVVRINACVVKDQESLVSEPHHKIRGKDRHPSRSSHPVSSTVDNKRSSTEEDSQSKAVNDQGSCSSMEFIKIPKDRLHTVHDLQVHLGDWYYLDGSGRERGPSSFSELQVLVDQGIIKKYSSVFRKSDKLWVPVTSTSETSEVSLRVHQESSSMSGECSGLQLSQTQSVSFSDPCSNSSLFNSIHSQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKQEIDKQIYKKSEVDPRASKRSRILVNHIEEDSEMEDGSLSIQKDESTFEDLCGDATFFGEKSGIVDSDMGSWGLLNGRILARIFHFLRPDLKSLVFASMTCKHWRASFRFYKEVSRQVNLSSFGLSCTDSMLWNIMNGYEKDKIRSMILMGCTNITADMLEKILISFPCLSTIDIRGCNQFGELTPKFSNVKWIKSQSSRITKITEEPYKIRTLKSISEQTSSVSKNSSLGTMDDFGELKEYFNSVDKRDTSKQLFRQNLYKRSKLYDARRSSSILSRDARTRRWAIKKSENGYKRMEEFLSSSLREIMKANSCDFFAPKVAEIEAKMKIGYYSGRGFSSLKEDISRMCRDAIKAKNRGEAGDMNHVITLFIQLATRLEKNSKSAQDRDALWKSWENESSSTSSKYKKNRMVTERKYRSNGAQGGLDNEEYASEREIRRRLSKLNKQSMGSESETSDELDRSSVDGNSNSETTISDTGSDQEVHSESRTAELKGDGYFTPGEGLDYITDDREWGARMTKASLAPPVTRKYEVIDHYVIVADEEDVRRKMQVSLPDDYAEKLNAQKNGTEESDMELPEVKDYKPRKKLGDEVIEQEVYGIDPYTHNLLLDSMPVELDWPLQEKHMFIEDMLLRTLNKKASHFTGTGNTPMSYPLRPVIEEIKRCAEEECDTRTIRMCQGILKAINSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSTDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYLIGIYTLRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKESHGILHRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERIKLPEEILRHNLDEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCVFGDPRRAPPPLEKLSPEAAVSVLWKGEGSFVEELLQCMAPHVEEDTLNDLKSKIYAHDPSGSRDIQKELQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKCFFRIQGYETTTSPPVYISPLDLGPKYTDKLGAGFQEYRKTYGENYCLGQLIFWHNQSNAEPDCSLARASRGCLLLPDIGSFYAKVQKPSRHRVYGPRTVRSMLARMEKQPQRPWPKDRIWSFKSSPNFFGSPMLDAVINSTPLDGEMVRWLKQRPTIFQAMWDQ 2379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0659 2379 Coils Coil 487 507 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 210 551 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 359 444 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 451 465 - -
Glsi04g0659 2379 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1960 2379 IPR045606 -
Glsi04g0659 2379 SMART set_7 1815 1955 IPR001214 GO:0005515
Glsi04g0659 2379 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 158 2379 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 1530 1625 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 921 962 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 261 287 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 295 335 - -
Glsi04g0659 2379 SUPERFAMILY F-box domain 1201 1257 IPR036047 GO:0005515
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 513 536 - -
Glsi04g0659 2379 ProSiteProfiles SET domain profile. 1810 1949 IPR001214 GO:0005515
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 472 497 - -
Glsi04g0659 2379 Gene3D Ribonuclease Inhibitor 1196 1333 IPR032675 -
Glsi04g0659 2379 SUPERFAMILY SET domain 1824 1972 IPR046341 -
Glsi04g0659 2379 Gene3D SET domain 1779 1981 IPR046341 -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 1558 1574 - -
Glsi04g0659 2379 CDD F-box_SF 1208 1235 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 210 252 - -
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 498 512 - -
Glsi04g0659 2379 Pfam SET domain 1887 1949 IPR001214 GO:0005515
Glsi04g0659 2379 MobiDBLite consensus disorder prediction 1591 1609 - -
Glsi04g0659 2379 CDD SET_SETD2-like 1823 1971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0659 Glsi-ChrGlsi04 4523956 4536005 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi04g0659 SET 4.5e-11 No_clan