Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0655 ATGTCTCCAAGTTGGTTCCACTCTTTAGAGAGAAAAGATAGCCGAAGCGATACTTCAACCTTGCCGTCACTTGTTACGAAGTTCCGAAAGGTCCTTGTTTCCTTCTGTTGTTCCGTCGTAATGGCTCCAAAGCGGCTCCTGGAAGACCCGCCTCCAGTAACTTCTTCTACGGAAGAAGAAGAAGAATCGGAGGACGATGCTGCTGAAGAAGAAGAAAATGGCGTTTCCGATGGAGTACAAGAGGAAGATGGCCATCAGAACAAGAAACCCACTACTAATAAGTCCACTGTCACCACCTCGTTAAAGGCTTCAGAACGCCAATCTTCGTCAGATTCCGGTGATGAATCCGGGTCGGAAACCGACTCCGAGTCCGACAAGAGTCAGCCATCGCCATCTGCTTCGGATTTCACCGTCAAACCCATTGTGTCCAAGCCTATGGATGATTCGGGGAAGCCCCAGAAACGTGATGCTAAGCGTAAGTTGACCCTAGCGCTAGCCGCGACTGCCACCGGCGGCAAGAAGCGCACAGGTCAGAGCGATATTGAAGGCAAAGAGTCAAAGAAGAATAAGTTATCTAATGGTCCAGAAGAAGATTTGAAAAAGGGATCTGGGGTTCACCGCCTTTGGAATGAGGCGGATGAGATTGCGATTTTGAAGGGCATGATCGAGTACCAATCCAAGAAAGGGGCTGACCCGTGTGCTGATATGGAGGCGTTTCATGGGTTTATTAAGAAAAGTCTTCATGCCGATGTATCTAAGATCCAATTGATGAGCAAAATCAAGAGGTTGAAGAAGAAATACCGAACCAGTGCAGAGAAGGGTGAAAACGGGGAAGACCCGGTTTTCTCTAAGCCGCATGAGCACAAGTTTTTCGACTTGTGCAAGAAAATATGGGGAGCTGCTTCCACCATTGGGGTGGATGACAATGCAAAGAATAAGAGAAAGCCAACCGGGAATCAAGTCAAGGCTGCTGCTGTAGCATCGCCAAATGGTGAGGTTAATGCTGAGCCAGCAAGTTCATGCCCTAATTCCACATTCTTGGAGGGGTTGCTGTTATCAGGGAAGCTTTTGCCACAATCGGAGCCTGCTGCAAACATTATGAAGGAAGCGTTACCTTTGTTAGGGAGTACGAAGGTCAAGGAGTTAGAAAGTAAGTGGAGGAAGTTGCAGGAGGATCAATGCCTTTTGTACTTGAAGAAGATCGAGTTGGTTCATGAAAGTGCTAAGCTGCTTTTGGAAGCAATGAAATCTTCCAAGTTTTAG 1263 0.4743 MSPSWFHSLERKDSRSDTSTLPSLVTKFRKVLVSFCCSVVMAPKRLLEDPPPVTSSTEEEEESEDDAAEEEENGVSDGVQEEDGHQNKKPTTNKSTVTTSLKASERQSSSDSGDESGSETDSESDKSQPSPSASDFTVKPIVSKPMDDSGKPQKRDAKRKLTLALAATATGGKKRTGQSDIEGKESKKNKLSNGPEEDLKKGSGVHRLWNEADEIAILKGMIEYQSKKGADPCADMEAFHGFIKKSLHADVSKIQLMSKIKRLKKKYRTSAEKGENGEDPVFSKPHEHKFFDLCKKIWGAASTIGVDDNAKNKRKPTGNQVKAAAVASPNGEVNAEPASSCPNSTFLEGLLLSGKLLPQSEPAANIMKEALPLLGSTKVKELESKWRKLQEDQCLLYLKKIELVHESAKLLLEAMKSSKF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0655 420 MobiDBLite consensus disorder prediction 54 77 - -
Glsi04g0655 420 MobiDBLite consensus disorder prediction 177 205 - -
Glsi04g0655 420 Coils Coil 53 73 - -
Glsi04g0655 420 MobiDBLite consensus disorder prediction 41 205 - -
Glsi04g0655 420 Pfam Protein of unknown function, DUF573 206 299 IPR007592 GO:0006355
Glsi04g0655 420 PANTHER BNAANNG10740D PROTEIN-RELATED 77 414 IPR007592 GO:0006355
Glsi04g0655 420 MobiDBLite consensus disorder prediction 123 137 - -
Glsi04g0655 420 MobiDBLite consensus disorder prediction 1 23 - -
Glsi04g0655 420 MobiDBLite consensus disorder prediction 90 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0655 Glsi-ChrGlsi04 4500826 4503817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0655 47 417 GeBP Transcription Factor Family AT1G61730 28.718 4.69e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Glsi04g0655 DUF573 1.9e-33 CL0123