Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0646 ATGTGTTTCTCAAATTCCACCTCTGTCCTCTCTATGGAAACCTTTTTTCCTTGCTTCCTAACAATCACTGGGAACCTATACGCTCACCATGCCTGCACACTCAAGCAATACAATAGTACTGATACTTTCCAAACAAACTGGAAAGAGATTCTGAATTATCTTTCTTATCAAACCCCACTCACAGGTTTTGGTTTAGGCTCCAAGGGTGAAGGCCAAGAAAGAGTCTACGGGCTCGCCCTTTGCCGCCCAGATAAGCCACCCGCAACCTGCGGGATTGGTCTTGCTCAGGCAATCGATGATTTAGACAAACGTTGTCAGTATTACAATGGTGGGGTCATATGGTACAACCTTTGTCAATTGAAGTGCTCGAATAGAGATTGTTTTAGTCAGGTTGATAACGCAAACCGGTACCAAAGAGGAAATGAAACTGTAAGCGACTCTGCACCCATGGATAAAAAAATCAGTGAGCTTATTGAGCAAAATGGCAGTGCAAGCTTCTGCGGACCCAAGAATGTCGGCTATGGATTGTCATTGTCCAACTTGCCCTGCAAACAGGATGTAAACAAGATTTCTGATATCTGTAAAGAGTCAAACCTAAACCGGCTTCTGGGTTACCTTTCACACGAAACAGCAACCACGGGTTTTGGAATGGGGTCCAAGGGTAAGGGCCAAGACAGAATAAATGGGCTTGCCCTTTGCCGCTCGGGTATCGCCACCTCAAACTGCACCCTGTGTCTCAACGACGCAATCAATGAGGCACCCAAACTCTGTCCCTATATAGCAAAGGAGCTATCTTATGATCCATCTCAACCATCCCCAATTGCTGTTCTGGGAAAAAAAATGCATAGCTTTATGGTGGAACTTGCGACGAAAACATGTTCCCTTTACTCAGCAACAAGTTCTGATCATGTCTTGAAACAACATTTTGAATATTTCACTCATCTTCTGATTCCGCTCGGTGGTGGGGGTGATGATCATAAGTCGAGGAAACTGTATGGCTCGGTTTGCCACAAGGGTCTTGATGAACAAGCTGAGAGAGACTTGAAGAGTTGTGATGAGAAACAAGGAGGAAGCGTTATCAGCGCCAGTTGTGCCATAAGATTTGAGATTTACAAATTCTTTTAA 1125 0.4453 MCFSNSTSVLSMETFFPCFLTITGNLYAHHACTLKQYNSTDTFQTNWKEILNYLSYQTPLTGFGLGSKGEGQERVYGLALCRPDKPPATCGIGLAQAIDDLDKRCQYYNGGVIWYNLCQLKCSNRDCFSQVDNANRYQRGNETVSDSAPMDKKISELIEQNGSASFCGPKNVGYGLSLSNLPCKQDVNKISDICKESNLNRLLGYLSHETATTGFGMGSKGKGQDRINGLALCRSGIATSNCTLCLNDAINEAPKLCPYIAKELSYDPSQPSPIAVLGKKMHSFMVELATKTCSLYSATSSDHVLKQHFEYFTHLLIPLGGGGDDHKSRKLYGSVCHKGLDEQAERDLKSCDEKQGGSVISASCAIRFEIYKFF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0646 374 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Glsi04g0646 374 Pfam Salt stress response/antifungal 196 262 IPR002902 -
Glsi04g0646 374 Pfam Salt stress response/antifungal 32 124 IPR002902 -
Glsi04g0646 374 Gene3D - 25 126 IPR038408 -
Glsi04g0646 374 Gene3D - 183 268 IPR038408 -
Glsi04g0646 374 ProSiteProfiles Gnk2-homologous domain profile. 177 284 IPR002902 -
Glsi04g0646 374 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 192 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0646 Glsi-ChrGlsi04 4432025 4435570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0646 25 257 Pollen Coat Proteome AT4G20670 24.051 8.89e-13 66.2