Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0643 ATGTGCAAGGGTACTGCACCAGATCAGGAAAAGCATGGTGGGTTCTGCAAGAGCCTTTCACCTGAAGACGTTGCTTCAATTGGCGCAATCAGAGGTTCAGTGTCTTGTGAGCTCTGTGGGTTAGAGGCTTCCTTGTATTGCCATGCTGATAATGCGTATTTATGTAGAAACTGTGATAAATGGGTTCATAAAGCCAATTTTTTGGCCCTCAGGCATATTAGGTGCTTTCTCTGCAATACATGCCAAAACCTCACTCGACGATATCTTCTTGGAGCCTCGGTTGAGGTTGTTCTTCCAACCATAGGAAGCCTAACTGACAACACCGACGACAGAAAAAATCATGTGTACAAAACTACTAAGGTGTTGTTGGGAAGAAAGGAGAAAGAGGAAAATGGAGGGTCCCAAACAGCCCCTAAGCAGTTTCTCAATTTCAATTCTATCAGCTTCTATAAGGCGAGATCATTTTGCTGGATTATATATCAACAACTGAGCATCAAGAACAACATCTTTGACAACTTCATCTTACATTCAACAAGTGGCATATACATCTCATTGTATTAG 561 0.4207 MCKGTAPDQEKHGGFCKSLSPEDVASIGAIRGSVSCELCGLEASLYCHADNAYLCRNCDKWVHKANFLALRHIRCFLCNTCQNLTRRYLLGASVEVVLPTIGSLTDNTDDRKNHVYKTTKVLLGRKEKEENGGSQTAPKQFLNFNSISFYKARSFCWIIYQQLSIKNNIFDNFILHSTSGIYISLY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0643 186 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 35 85 - -
Glsi04g0643 186 CDD Bbox1_BBX-like 36 77 - -
Glsi04g0643 186 SMART bboxneu5 31 77 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0643 Glsi-ChrGlsi04 4412497 4413402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0643 1 114 C2C2-CO-like Transcription Factor Family AT3G21890 45.455 1.29e-26 96.7