Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0642 ATGGAACCCGTATGTGAGTTTTGTGGAGTTGTGAGAGCGATGGTTTATTGCAAGTCAGATTCTGCCAGTCTCTGCTTGCCTTGCGATGGATTAGTACACTCTGCCGATTCTTTGTCAGGCCGGCATAATCGTTCCCTCCTGAGTGATAAGTGCAATTCCCAGCCAACAATTGTCCTCTGCATGTCTGATAAATTGCCTGTGTGCCACCAAGCTTGTGACTGGAATCAAAATGGTTGTTCAGTATTGGGACATAGACGTGAGGAATTGAATTCTTATACGGAACTATGGTCCACTGTTCTTGATGCTTCTTCTTCATTGGTTGGTCTTGATTCTGGTTGGGAATCATTTAGCCTGTTGCCTAAAAACGACAGCCGCTCCAGCAAGTGTTTGAAGCAACCAGATAATGATGGCTCCTTTGGTTTTGTAACTGGCAAGTTGGTTAAAATAGAACCATGTGCTAAATTTGAACCTTGGATGGTGCAATCTTCTTTCATGCCACCAAATCCAAATTACCAGCCCTTCTGTAGAGATCAAGCATTATCATCAGTTCAACAAGATAGTGTGGCCTGTCAATCTTCCAGGGTCGGTGGGTTAGATAATGTGGTGCAGACCATCAACAGTAATGCAAATTATGTACTGATGAGTCTCGTTTGCAACAAAAACATCAATTTAGGATTTCCCCAGGCTCGATTTCATTCAAGCACATCACTTTCATTATCAAACATTACTGGTGAAAGTAGTACCCCTGATTATCAGGATTGTGGGTTATCACCAGTATTCCTGACAGAACATTTAAGCATATTGCCTGAAACCACTATCATTTCCCTTGCAATATGTGATTCTGACTGATCTCTTAGAGCTTTGAACAGGAGAAATTGTGAGTTGCTGGGCTTATGTATCACACATAAACACCATCCACTAAAGAATGAAAGGGAAAGTGGTGGTTGGCAAGCAACCTCAGGCAACCACACATTTTCTGCTTCCAGTTTGTTCTTCCCTGATAGGAATGGACCCCAAGATCTAAACAACTGCTCCCTTGCTCCGTGCTCATATGCTAAGGTTCAAGGGCAGCAGGCACCATCTTTTGGCAACTCTACATTTAGTCGTTTTTCATCAGATTATTTGAGCATGGCCAACTGTTGA 1143 0.4278 MEPVCEFCGVVRAMVYCKSDSASLCLPCDGLVHSADSLSGRHNRSLLSDKCNSQPTIVLCMSDKLPVCHQACDWNQNGCSVLGHRREELNSYTELWSTVLDASSSLVGLDSGWESFSLLPKNDSRSSKCLKQPDNDGSFGFVTGKLVKIEPCAKFEPWMVQSSFMPPNPNYQPFCRDQALSSVQQDSVACQSSRVGGLDNVVQTINSNANYVLMSLVCNKNINLGFPQARFHSSTSLSLSNITGESSTPDYQDCGLSPVFLTEHLSILPETTIISLAICDSDXSLRALNRRNCELLGLCITHKHHPLKNERESGGWQATSGNHTFSASSLFFPDRNGPQDLNNCSLAPCSYAKVQGQQAPSFGNSTFSRFSSDYLSMANC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0642 380 CDD Bbox1_BBX-like 4 47 - -
Glsi04g0642 380 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 259 - -
Glsi04g0642 380 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Glsi04g0642 380 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0642 Glsi-ChrGlsi04 4408888 4411899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0642 1 261 C2C2-CO-like Transcription Factor Family AT3G21880 31.081 7.94e-29 113