Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0637 ATGGTTCTCCATTTTGGTGAGTTTGAAACAAAAGTACTGTGGATTTTGATTCTAGTTGCTCTGCATCTTAACAGTACCGAGCTGGAATCTGTAACTTTCCACCGAGACAAGCAATCATGGCAATTAAATTGCAGAGAGAAGCAGCCTACCTTTGACATATACTTTGAAATGTTCGTTGTTGACGATATTAATGTGGCTTTTCCTACGCAACCCACAAGTAGAGAGAGCAAACTGGGTTGCCTTGGAGCCACAGAATTTACAAGTTACACAGGCTACAAGAAAAAGGCTTCAACCCGTGATCCAGAAATATACCCAATTATACCACTCAATAATGTCAAGAAGTTTCAGAAAACAGAAATTACTCTGGCAACGACGAGCTCTGCCAGCCACATGAGAATGGGAACCCAGAGTTGCTTCAGGGTTTTAATTCTTTGTCTTTTTGCATTAATTGCATCAACTCAGGCTCAATTGCAGCTAAATTTTTATGCCAATAGCTGTCCTAAGGCCGAGAAGATCATCTTTAACTTTGTTAATGAGCATATCCACAATGCCCCATCATTGGCAGCTGCCCTCATAAGAATGCAGTTCCATGACTGCTTTGTCAGGGGCTGTGATGCATCGGTGCTTCTGAACTCAACAACCAACCAAGCTGAAAAGAATGCTCCTCCAAATCTCAGCCTCAGAGGTTTTGACTTCATTGACAGAATAAAGAGCCTGGTTGAAGCTGAATGCCCTGGAGTAGTCTCTTGTGCTGATATTATAGCTTTGACTGCTAGAGACTCCATTGTTGCCACTGGTGGTCCCTTCTGGAAAGTTCCAACAGGTAGAAGGGACGGGCTTGTGTCTATCTTAATAGAAGCCAGAAATGGCATTCCTGCTCCATTTCACAACCTCACCACCCTCCAAGGAATCTTTGCCAACGTGGGACTTGATTTGAAAGACTTGGTCCTTCTCTCTGGTGCACACACAATTGGGGTCTCCCATTGCTCATCCTTCTCAAATCGGCTCTTTAACTTTACCGGTAAGGGTGATGAAGACCCGGCTCTAGACAGTGAATATGCAGCAAATCTGAAGAAGTTCAAGTGCAAGAATATCAATGATAATACCACACTTGTTGAGATGGACCCTGGAAGCCGCAAGACATTTGACCTTAGCTACTATGTTCAGGTCGTTAAGAGAAGGGGTCTATTCGAATCAGATAGTGCATTGTTGACCAACTCAGTCACAAAATCTACCATCACCCAGCTGCTTCAGGGTTCAGTTGAGAATTTCTTTGCTGAATTTGCCAAGTCCATGGAGAAAATGATCCAAATCAATGTCAAGACTGGGACACAAGGAGAGATCAGGAAGCACTGTGCACTTGTAAACAGCTAA 1374 0.4345 MVLHFGEFETKVLWILILVALHLNSTELESVTFHRDKQSWQLNCREKQPTFDIYFEMFVVDDINVAFPTQPTSRESKLGCLGATEFTSYTGYKKKASTRDPEIYPIIPLNNVKKFQKTEITLATTSSASHMRMGTQSCFRVLILCLFALIASTQAQLQLNFYANSCPKAEKIIFNFVNEHIHNAPSLAAALIRMQFHDCFVRGCDASVLLNSTTNQAEKNAPPNLSLRGFDFIDRIKSLVEAECPGVVSCADIIALTARDSIVATGGPFWKVPTGRRDGLVSILIEARNGIPAPFHNLTTLQGIFANVGLDLKDLVLLSGAHTIGVSHCSSFSNRLFNFTGKGDEDPALDSEYAANLKKFKCKNINDNTTLVEMDPGSRKTFDLSYYVQVVKRRGLFESDSALLTNSVTKSTITQLLQGSVENFFAEFAKSMEKMIQINVKTGTQGEIRKHCALVNS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0637 457 PRINTS Plant peroxidase signature 430 443 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 247 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 373 388 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 166 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 190 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 389 406 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 228 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Plant peroxidase signature 313 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 SUPERFAMILY Heme-dependent peroxidases 156 456 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 FunFam Peroxidase 160 304 - -
Glsi04g0637 457 ProSitePatterns Peroxidases active site signature. 188 199 IPR019794 GO:0004601
Glsi04g0637 457 PRINTS Haem peroxidase superfamily signature 314 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Haem peroxidase superfamily signature 248 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Haem peroxidase superfamily signature 375 390 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Haem peroxidase superfamily signature 188 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PRINTS Haem peroxidase superfamily signature 266 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 Pfam Peroxidase 175 415 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 Gene3D - 161 456 - -
Glsi04g0637 457 Gene3D Peroxidase, domain 2 292 435 - -
Glsi04g0637 457 ProSiteProfiles Plant heme peroxidase family profile. 156 456 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 PANTHER PEROXIDASE 25-RELATED 146 449 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0637 457 FunFam Peroxidase 292 435 - -
Glsi04g0637 457 CDD secretory_peroxidase 156 455 IPR033905 GO:0004601|GO:0042744
Glsi04g0637 457 ProSitePatterns Peroxidases proximal heme-ligand signature. 314 324 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0637 Glsi-ChrGlsi04 4377013 4381009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0637 146 457 Peroxidase AT1G05260 69.551 5.36e-165 466