Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0634 ATGGCTGTTTCCAAGACAATCATCTGGAATAAATTTGTCATTATTCTTCCATGTTCCTGCCTCAGTCTATGTTCATTTCTGTGTCTTTGGCTCCTTAATTACACAACGTTTGATGATGCTGAAATGGACCCATTACGTATAAAGCAAAGTGCAAACAGGGTTCCTTCACAGCATCTTCGCTATCCAAGCCTGAAACTTTACTCCTTTTTTGAGCTTGTTATTGCAATGGCTGACATGGATCGCTCTTCTGATGATGTTTCTGGAGATTCCACAGAGCAATCCAGTCAAGCTTCCATAGTTGAATTTTCTGAAGATGAGGAAACTCTTATAACGAGGATGTACAATCTGGTTGGGGAGAGGTGGTCCTTGATTGCTGGAAGAATTCCTGGAAGAACAGCAGAGGAAATAGAGAAATACTGGACTTCAAGATACTCAACTAGCGAGTAA 447 0.4094 MAVSKTIIWNKFVIILPCSCLSLCSFLCLWLLNYTTFDDAEMDPLRIKQSANRVPSQHLRYPSLKLYSFFELVIAMADMDRSSDDVSGDSTEQSSQASIVEFSEDEETLITRMYNLVGERWSLIAGRIPGRTAEEIEKYWTSRYSTSE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0634 148 CDD SANT 101 140 IPR001005 -
Glsi04g0634 148 Gene3D - 101 143 - -
Glsi04g0634 148 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 101 144 - -
Glsi04g0634 148 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 148 IPR017930 -
Glsi04g0634 148 ProSiteProfiles Myb-like domain profile. 102 144 IPR001005 -
Glsi04g0634 148 SUPERFAMILY Homeodomain-like 102 144 IPR009057 -
Glsi04g0634 148 FunFam MYB-like transcription factor 101 143 - -
Glsi04g0634 148 Pfam Myb-like DNA-binding domain 101 141 IPR001005 -
Glsi04g0634 148 SMART sant 98 146 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0634 Glsi-ChrGlsi04 4365289 4368232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0634 101 142 MYB Transcription Factor Family AT5G35550 61.905 2.58e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi04g0634 Myb_DNA-binding 8.1e-08 CL0123