Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0592 ATGCCCTTCCTCATGACCATGTCTACCACCATGTCATCATCGCCGTCGCTGGTATCTCCTTCGACGCCGCCTTCTCCGACTGGATTGCCGGTACGGCCTCTTCCCGGAAGTTACGGTTGGCCGTTGCTCGGCCCTATCTCCGATCGCCTGGACTACTTCTGGTTCCAGCAACCAGAGGGATTCTTCAGAAAGCGGATGGAGAAGCACAAGAGCACCGTCTTCCGTACCAATGTCCCTCCTTCTTTCCCTTTCTTCCTGGACGTGAACCCAAACGTTGTCGCTTTGCTCGATTGCAAATCCTTTTCCCACCTCTTCGACATGGAGCTTGTGGAGAAGAAGAACGTCCTGGTCGGAGATTTCATGCCTAGCGTCGCCTTCACCGGAAACATCAGGGTTGGCGTTTACCAGGACACTTCTGAGCCTCAACACTCCAAGATCAAGAAGTTCTGCATTGACATCCTGAAACGGAGCTCCGGCATATGGGTATCCGAACTCGTATCCAATCTCGACACTTTGTGCGACAACATCGAAGCATCCCTCTCCAAATCCGGCTCCGCCAGCTACTTGTTCCCACTCCAGCGATTCCTCTTCGCCTTTCTCTGCAAAGTTCTCTCCGGCGCCGACCCTTCACGCGACCCCAAAATCGCCGAGTCCGGCTACGCCATGCTCGACCGTTGGCTCGCCATCCAGCTTCTCCCCACTGTCAGTATTGGCTATCTTCAGCCTCTAGAGGAGATTTTCCTCCATTCTTTTACCTACCCCTATTTCCTTGTCAGCGGAGGCTACAATCATCTCTATGAGTTCATAAAAAAAGAAGGTAAAGAAGTAATAAACAGGGCAGAAACCGAGTTTGGATTGAGTCAAGATGAAGCGATCCACAACTTGCTGTTCGTGCTGGGTTTCAACGCGTTCGGTGGGTTTTCGATTTTTCTCCCGACTTTGATAGATACAATATCGAGCAACGGAATCGGATTGCAAGAGAAGCTGAGGAAGGAGGCAAGGGAAAAAGGCGGGTCAACTCTGAGTTTCGACTCGGTGAAAGAGATGGAGCTGATTCAGTCGGTAGTGTACGAAACTCTACGGCTAAACCCACCTGTGCCGCTGCAATACGGCCGAGCGAGGAAGGATTTCCGGCTGAGTTCGCATGACTCATCGTACGAGATCAAGAAGGGTGAGTTGCTTTGTGGTTACCAGAAGCTGGTGATGAGGGACCCGACCGTGTTCGATGACCCGGAAAGTTTCAAGGCGGACCGGTTTACCAAAGAGAAAGGAGCGCAGCTGTTGGATTATTTGTATTGGTCCAATGGGCCACAAACCGGGATACCCAGCGAGTCCAATAAACAATGTGCAGCTAAGGACGTTGTCACTCTCACTGCGTCTTTGATGGTGGCCTACTTGTTTCGCAGATATGATTCCATCAAGGGGAATTCAAGTTCAATCACTGCCGTTCAAAAGGCCAAATGA 1464 0.513 MPFLMTMSTTMSSSPSLVSPSTPPSPTGLPVRPLPGSYGWPLLGPISDRLDYFWFQQPEGFFRKRMEKHKSTVFRTNVPPSFPFFLDVNPNVVALLDCKSFSHLFDMELVEKKNVLVGDFMPSVAFTGNIRVGVYQDTSEPQHSKIKKFCIDILKRSSGIWVSELVSNLDTLCDNIEASLSKSGSASYLFPLQRFLFAFLCKVLSGADPSRDPKIAESGYAMLDRWLAIQLLPTVSIGYLQPLEEIFLHSFTYPYFLVSGGYNHLYEFIKKEGKEVINRAETEFGLSQDEAIHNLLFVLGFNAFGGFSIFLPTLIDTISSNGIGLQEKLRKEAREKGGSTLSFDSVKEMELIQSVVYETLRLNPPVPLQYGRARKDFRLSSHDSSYEIKKGELLCGYQKLVMRDPTVFDDPESFKADRFTKEKGAQLLDYLYWSNGPQTGIPSESNKQCAAKDVVTLTASLMVAYLFRRYDSIKGNSSSITAVQKAK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0592 487 PANTHER CYTOCHROME P450 26 29 470 - -
Glsi04g0592 487 SUPERFAMILY Cytochrome P450 30 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0592 487 Pfam Cytochrome P450 325 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0592 487 MobiDBLite consensus disorder prediction 1 18 - -
Glsi04g0592 487 Gene3D Cytochrome P450 29 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0592 487 PRINTS E-class P450 group IV signature 349 365 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0592 487 PRINTS E-class P450 group IV signature 402 420 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0592 487 PRINTS E-class P450 group IV signature 386 400 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0592 487 MobiDBLite consensus disorder prediction 1 28 - -
Glsi04g0592 487 CDD CYP74 63 473 - -
Glsi04g0592 487 FunFam Allene oxide synthase, chloroplastic 29 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0592 Glsi-ChrGlsi04 4036383 4039239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0592 107 487 Cytochrome P450 AT4G15440 60.156 2.68e-174 493