Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0589 ATGCAAAGTCGACAACCAGAACACGCCATCCCCATCAGTACAGAGATCAAAGCTCACTGGCTCTCCTTCCTCTTCTTTCTTTCTTCCTTTATATTCTTAACCTGCCCTCAGATCAAATCCGCCGCCACAGAAACTGATTCCATTTCCCTTCACTTGCAGAAAAAGAGGCGAAAGAAAAAAAAAATGTCCACCACTTCAGATTCTATCGTCCATGATCCTCCACATGTAGTGGACGATTGTCGCGGTGTTCTGCATGTTTATAGCGATGGGACCATCGTACGCTCCTCAAAGCCACTCTTCGATGTTCCCGTCCATGACGACGGCTCCGTTTTGTGGAAAGATGTCGTTTTTGATCCTGACCATAACCTCCACCTTCGTCTTTATAAGCCTGCTGGTTCATCTTCTTTCCGCACCCCCAAGCTTCCGATTTTCTACTATATACACGGCGGTGGGTTCTGTATCGGCTCCCGTACCTGGTCTAACTTTCACAACTACTGCCTCCGGCTCGCTTCGGAGCTTCGAGCTGTAGTAATCTCTCCGGATTATCGGCTGGCTCCGGAGAACCGACTCCCAGCTGCTATCGATGATGGATTCAAGGCTGTCAAGTGGCTCCAAGCCCTGGCCGTAAGCGCTGACCTGGATACGTGGTTGAGCGAAGTCGCTGACTTTAATCGGGTGTTCATTTCAGGCGACTCGGCCGGTGGAAACATTGCTCACAATTTGGCGGTCATGCTCGGGCCTGGGTCGCCCGAGTTGGCGCCGGTTCGGGTTAGAGGTTACGTCCTCTTGGCACCTTTCTTTGGTGGTACCATCAGAACCAAATCAGAAGCTGAAGGACCAAAAGATGCTTTCCTCAATTTAGAACTCATTGATAGATTTTGGAGGCTCTCTATACCGATTGGATATAACACTGATCATCCCCTTGTGAATCCATTTGGGCCATTGAGCAAGAACCTTGAAGCCGTTGATCTTGACCCAATACTAGTGGTGGTTGGAGGAAGTGATTTGCTAAGAGATAGAGCTGAGGAATATGCAAGAAGGCTTAAGAATTGGAGGAAGACTATAGAGTATGCAGAATTTGAAGGAATGCAACATGGGTTCTTCACTTTTGATCCTACTTCAGAAGATGCAAAAAGGTTGATGCTAATCATCAAGCAATTCATAGACAAACATTCAGGCTGA 1182 0.478 MQSRQPEHAIPISTEIKAHWLSFLFFLSSFIFLTCPQIKSAATETDSISLHLQKKRRKKKKMSTTSDSIVHDPPHVVDDCRGVLHVYSDGTIVRSSKPLFDVPVHDDGSVLWKDVVFDPDHNLHLRLYKPAGSSSFRTPKLPIFYYIHGGGFCIGSRTWSNFHNYCLRLASELRAVVISPDYRLAPENRLPAAIDDGFKAVKWLQALAVSADLDTWLSEVADFNRVFISGDSAGGNIAHNLAVMLGPGSPELAPVRVRGYVLLAPFFGGTIRTKSEAEGPKDAFLNLELIDRFWRLSIPIGYNTDHPLVNPFGPLSKNLEAVDLDPILVVVGGSDLLRDRAEEYARRLKNWRKTIEYAEFEGMQHGFFTFDPTSEDAKRLMLIIKQFIDKHSG 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0589 393 SUPERFAMILY alpha/beta-Hydrolases 71 391 IPR029058 -
Glsi04g0589 393 Coils Coil 334 354 - -
Glsi04g0589 393 Gene3D alpha/beta hydrolase 83 392 IPR029058 -
Glsi04g0589 393 PANTHER ARYLACETAMIDE DEACETYLASE 80 372 - -
Glsi04g0589 393 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 226 238 IPR033140 -
Glsi04g0589 393 Pfam alpha/beta hydrolase fold 145 368 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0589 Glsi-ChrGlsi04 4019815 4021093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0589 66 367 Carbohydrate Esterase AT1G68620 37.705 9.50e-59 192