Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0584 ATGGATCTTGAGTTGATCAGAATCGTTCAGGAGACTATAAGTCGCATGTCACCCGCCGAGTTAGCTCGGATCCAACGGCAGATGATGTCTAATCCAGATTTAATGAGGATGGCCTCAGAAAGCATGAAGAGCATGAGGCCTGAAGACTTCAAACTTGCTGCAGAGCAGTTAAAGCATACCCGTCCAGAAGAGATGGCCGAGATTTGTGGGAAGATGGCTAATGCAACACCTGAAGAAATCGCAGCTATGCTTGCCCTTGCTGATATCCAAATGAAATATGAATTAAATGCTGCTGAGAGGTTGAAGAAGCAGGGGAATGAACTTCACAGTCAGGGAAAGTTCTACGATGCTATGGAGAATTATCTTGTCGCTAAGCATAAGATTAAAGAAATTCCATCTTCCCAAAGTAGAAAGCTTCTTTTGGCATGCTCACTCAACTTGATGTCTTGTTACTTGAAGACAAGACAGTATGATCAATGCATAAAAGAAGGTTCTGAGGTTTTGGCATATGATGCAAATAACGTTAAAGCTTTTCATCGAAGGGGTCAAGCATATAAGGAACTAGGTCTACTGAAGGAAGCTGTTGCTGATTTGAGCATGGTATGTGAAGTGTACCCTGACGATGATAAAATAGCAGGGCTTTTAAGGGACACCAAGGAAATGTTGACAAACGAAGGTGGTGAGCATGCACCTGGAAGAATGTCCAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAAGAGCGTACACCTGGAAGATTAGTAAGTGAAGAAATAACTGAAGAACTCGAGAACGTGTCTTCTAGAAGCTTCGGAAGCTCATCTGTGGAGCAAACAATTTTGAAGCACAGTAGGTTTGGTTTTGGAGTGTTCTTTCTTAACATCAACTGTTGGGAATTCCTGATAGCTAATCTTTCAATGCAATCACCAACTAGTAATGGATTGTCTATGTGGCCTATTGGTGTTCTTTTCACTTCTAGTGATTGATCATTCCAAAATTTCATTTCAAATGCTGATCCTACTCCTCTGGCTTCTTCGAATGCTGGACAATCCAGAGATGTGTCTCCTGATATGATTAGAACTGCCTTAAATATGATCAGCAAGGTGTCACCTGGGGAACTTCAAAGAATGCTTGACATGGATTCTTCATTTCAGGGGGACAACCCATTTTTAAGAGGTTCCCCTGATTCTACTTTCGACCCTGGATCAATTCCTCCCAATGTGACACCTGAAATGTTTAAAACAGATACTGATATGATAAGTAAAATGCAACCAGATGATCTTCAGAAAATGCTTGAAATGGCTTCCTCATTGAAAGGGAAAGAATCTATATCGTCATCCCCAGCTATAGACAAGAATGTGAGAAATGCTTCTCATTCAGACATCCCCTCAAGTGCTGATGGAAGTAATGCTCTTGGTGAATCTAGCTCTTCTGACGATTCATTTTCAAATGTGAGAAATGCTTCTCCATCAAACTTCTTTACTCGCCATCTTTGTGTATCTGGTTGTCAAATGTTCACATCAATGATTAAAAATATGAGCCCAGAAATGATGGAAAACATCGACGAACAATTTGATTTCAAGCTTTCAGAAGAAGATGCAGCAATAGCTCAGCAAGCCATGTCATCCTTGTCGGACTTGGATAAAATGATGCGATGGGCGGCTAGGATTCAAAGAGTTGTTGAAGGTGCAAAAAAGACAAAGAACTGGCTGCTAGGGAAACCTGGGATGATCTTGGCAATATTCATGCTCATTTTGGCTATAATTCTTCACCATTATTAG 1785 0.405 MDLELIRIVQETISRMSPAELARIQRQMMSNPDLMRMASESMKSMRPEDFKLAAEQLKHTRPEEMAEICGKMANATPEEIAAMLALADIQMKYELNAAERLKKQGNELHSQGKFYDAMENYLVAKHKIKEIPSSQSRKLLLACSLNLMSCYLKTRQYDQCIKEGSEVLAYDANNVKAFHRRGQAYKELGLLKEAVADLSMVCEVYPDDDKIAGLLRDTKEMLTNEGGEHAPGRMSKKKKKKKKKKKKKERTPGRLVSEEITEELENVSSRSFGSSSVEQTILKHSRFGFGVFFLNINCWEFLIANLSMQSPTSNGLSMWPIGVLFTSSDXSFQNFISNADPTPLASSNAGQSRDVSPDMIRTALNMISKVSPGELQRMLDMDSSFQGDNPFLRGSPDSTFDPGSIPPNVTPEMFKTDTDMISKMQPDDLQKMLEMASSLKGKESISSSPAIDKNVRNASHSDIPSSADGSNALGESSSSDDSFSNVRNASPSNFFTRHLCVSGCQMFTSMIKNMSPEMMENIDEQFDFKLSEEDAAIAQQAMSSLSDLDKMMRWAARIQRVVEGAKKTKNWLLGKPGMILAIFMLILAIILHHY 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0584 594 SMART tpr_5 175 208 IPR019734 GO:0005515
Glsi04g0584 594 SMART tpr_5 98 131 IPR019734 GO:0005515
Glsi04g0584 594 SMART tpr_5 141 174 IPR019734 GO:0005515
Glsi04g0584 594 SUPERFAMILY TPR-like 92 217 IPR011990 GO:0005515
Glsi04g0584 594 Gene3D Tetratricopeptide repeat domain 86 251 IPR011990 GO:0005515
Glsi04g0584 594 MobiDBLite consensus disorder prediction 381 487 - -
Glsi04g0584 594 MobiDBLite consensus disorder prediction 233 250 - -
Glsi04g0584 594 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 1 229 - -
Glsi04g0584 594 MobiDBLite consensus disorder prediction 440 487 - -
Glsi04g0584 594 ProSiteProfiles TPR repeat profile. 175 208 IPR019734 GO:0005515
Glsi04g0584 594 MobiDBLite consensus disorder prediction 222 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0584 Glsi-ChrGlsi04 3994879 4003019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0584 88 211 Calmodulin-binding Proteins AT5G48570 31.538 2.22e-12 67.8