Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0574 ATGGGTGTCTCAGGGAAGTGGATTAAAGCATTGGTTGGTCTAAAGAAATCTGAAAAGCCAGAGTCTTCAGAGAAGGATGGAAGTAGGGCTCGCAAATTACGGCATCGGAGGAAACATTCTATTGAAATCGACAGCGATAAACTCCAAAGTGAACTTAATCATGATGCTACTCCTGTTGGAGATGCCAATTCTCATTCAAACGCTGATGCCCAATATTCACCTTCTACTTCACTACAAGCACAAGATGCTGCACATAGCCATCAAATTTTGAGGGAGGAATGGGCGGCGACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCAGAAGAGCACTGAGAGCTTTGAAAGGATTGGTAAGACTTCAGGCCCTTGTAAGAGGCCATGCTGTGAGAAAACAAGCTGCTATAACTCTCCGTTGTATGCAAGCTTTGGTCAGAGTTCAGGCTCGTGTTCGAGCCAGGCGTGTTCGCATAGCATTGGAAAGTGAATCAGCACAACAGAAACTTCAGCAACAGCTTGCGAATGAAGTTCATGTTAGAGAAATAGAAGAAGGTTGGTGTGATAGCGTGGGATCTGTCGAAGAAATTCAAGCCAAATTATTAAAGAGACAAGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTTTGGCACATCAGTGGCAGGCAGCATCAAGGCAGCAAACTGCTGCTTCTGGGTTTGAACCAGATAAAAGTGGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGCTTTCTTGACTTTAATTTGAGGGATGGAGTAAAGGTATGTGAAAATGAAGCAGCGGAGGATAAAAACGGAATCAGATCTCAATTAAAATCTGCTACCAAGAAATCAGTTCCATCAAATATTCATCCAAACCTTGCAAGCCAGAAAATGGGTCCCTCTCTTTCTGATGGCTGCGATTCTTCACCTAGTAAGTCAGCAGGTTTGCTGGAGGCATCGAACACACAGATCACTAAGCCAAATGTTGAAATTCCTATTGAAGAAGCCAACTCAAGACCTGGACCTGGATCAAGATCTCATAGTAATCCCAAGGAGAGAACCACGCAAGCTGATAAACAGGCAAAAAAACGATTATCTCTGCCTAACAATGCAGGGGTTGGCCCTGGGACAAGACATCCTACCAGAACTAATGTCAAGGGGACTATCAGCACGCAGAAGCCTATTAGGGACAAGCCTAAGCTCAATGGAAGAGGGGATTCAAATCCCACAAAATTTGTTCCTCAGCCCACGAATCAGCAGCTTTAA 1296 0.4506 MGVSGKWIKALVGLKKSEKPESSEKDGSRARKLRHRRKHSIEIDSDKLQSELNHDATPVGDANSHSNADAQYSPSTSLQAQDAAHSHQILREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESESAQQKLQQQLANEVHVREIEEGWCDSVGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQTAASGFEPDKSGWGWNWLERWMAVRPWENRFLDFNLRDGVKVCENEAAEDKNGIRSQLKSATKKSVPSNIHPNLASQKMGPSLSDGCDSSPSKSAGLLEASNTQITKPNVEIPIEEANSRPGPGSRSHSNPKERTTQADKQAKKRLSLPNNAGVGPGTRHPTRTNVKGTISTQKPIRDKPKLNGRGDSNPTKFVPQPTNQQL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0574 431 Gene3D - 91 134 - -
Glsi04g0574 431 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Glsi04g0574 431 SMART iq_5 91 113 IPR000048 GO:0005515
Glsi04g0574 431 SMART iq_5 114 135 IPR000048 GO:0005515
Glsi04g0574 431 MobiDBLite consensus disorder prediction 14 84 - -
Glsi04g0574 431 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Glsi04g0574 431 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Glsi04g0574 431 MobiDBLite consensus disorder prediction 56 84 - -
Glsi04g0574 431 PANTHER IQ-DOMAIN 5-RELATED 1 383 - -
Glsi04g0574 431 FunFam IQ-domain 11 91 142 - -
Glsi04g0574 431 MobiDBLite consensus disorder prediction 280 431 - -
Glsi04g0574 431 MobiDBLite consensus disorder prediction 14 29 - -
Glsi04g0574 431 MobiDBLite consensus disorder prediction 287 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0574 Glsi-ChrGlsi04 3925335 3937575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0574 1 421 IQD Protein Family AT3G22190 56.308 2.59e-130 380