Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0558 ATGGCCTGCCGGACATTGATCGCTGGAAACCTGGATCCAGAGAGAACGAGAAGTGGTGGGTTGAGAACTAAACAGGCGGGAAGAGGATCTTCGGAAAACTTGTTCGTGCTTTTATATTCCGTCGTTGAAACGATGGGCTTTTTGTTGCAAGAAGCTCTGAAAACTATGTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGGTGCCATAATCCTAAGCTGTTAATCTGGGAAGAATGCTATTATGAACCCTTGCCATGTCCTTTTCCTCCACACATTGATGGAATTGGGACATCTAACTTGTCTTTTGGAGGTGGGGAAGGGGACAGAGTCTGTTCGTTGATTAACAGAATGATGGTGAATAATTCAGTCAATATTGTGGGAGAAGGGATAGTTGGGCGGGCTGCATTTACAGGAAACCATCAGTGGATTCTTTTGAACAGTTTTACAAGAGAGGCATACCCACCAGAGGTTTATAATGATGTGCATCAACAATTTTCGGCAGGAGTGCAGACCGTAGTGGTTATTCCTGTGCTTCCCCATGGGATTATTCAACTTGGTTCTTTCTCAGCAATGATGGAGAATATTGGCTTTGTGAATGATGTGAAGAGTTTAATCTTGCAATTGGGATGTATTCCGGGTGTTCTTTTATCTGAAGATTATTCAGCAAAAGCTTCTACTGAAGGACTTGGTGCAACTGTTACTGTTGGGGTGCCTGTGTCTGTAGATCCACGAGTTGTTACCTCAAATTGCAGTCCCTCAGTAAATGGCTCCAACCAACAAAGCAATTCATCTTATACTCAAGGGCCCATTGTTCAACCATCTCTTCCTCAAAGGGGAGATATAAATAATCACCAGGTTTCTGTATTGACACATCAAAACCCTAACCTGACTCAGGTATTTTCCAAGTATCATGATAACGTCTGCCAACCCAAGGAAATTCCAATAACAAAACCAAACTTTACTCGCCAACTAGAGAATAGAGTTGTGGAGGCGCAAGTGATACCCTCAAATCTTGGTTCATGTCCCCAACAGCCTTCTTTTTTGTATAATTCAAGATCTGCATTTAATGAATTAACTGGTTTTGGCCAATCAGGTCTGAGTGACTGCAGCATAAAATTTATGGAACAACAAATCTTGTCAGGCAGTGGGAGTCAAAATTATGTCAATCCTAATATAAATGCTGCCTTAAATATGACTCAGCTGAAGGCAAATGGAGGCCATATACTTGACCATAGTCAGAATTCAGTTAGTACTTCATTACTTGGAGGAATCCCGATACATGGTGGAATGAGTAGTCTTTCAAGGCCAACTCTGGTTACTAGCTCTTTTTCCAAACCTCCCAAAGCGGCTGCTACTGATTTTTCTGGAATACATAAAGCTGGGACTCGACTTCAGAATGATGATTCAACTAAAGCAGGGGATTATTCTCTTCCTAATTTGGCAAATCAATTAGGTACTAGTCACATGACTCTAGAAGTCTCTGATCAGAAGAATCTTCCCATGGATTTAAAGTGTACTCATGACAAGTTGGCACGAACGGATCGAAAGATAGATGATGATTTGCTTCAGGCCCATAAGATCCCAGCCCTTCAACTTGAGAAGCATGTGTCTGTGAGTGATCAAGTCCCGAGTTTTGTAAATGACTGCCTTAATAATGTTGGTGCAAATCAATCTTTGAGGAAGCAAGAAGCTTGTGCTCAATCTTCTTCAGGCGATGATCTATTTGATGTTTTAGGTGTGGATTTTAAAAAGAAACTATTGAATGGAAACTGGAATAAGTTACTTGTTGATGAATCAGATATTAATGCAGAAATTCTGGGCAAAAAAACAGCGTGTAAAAATATGCACAGTGTAGATCCTGATTGCTATTCAGTTAATGAAGCAATGTCAGATAGTGATGGCTTCCCTTGGAGGGGCACTGACCACCTATTGGATGCTGTGGTCTCAAGAGCTCAATCTGCTGTGAAGCAGGATTCTGATGATATGTCTTGCAAGACGACGTTGACTGGGATTAGTAGTGCCTCTGTTCCCTCTTCTGCCAACAGGCAGGTTTTGTCTGATCATGTTCTCGGTGGATTGTTTGACTTTCCTAAGACTAAGGGTAAATTGGGTGCTGCAGAAAGTGGTTCTCTTAGGTCTGGATGTCGCAAGGATGACACTGGAAATGGTTCTCAAACTACTTCCATATATGGGTCTCAACTTAGTTCATGGGTTGAGAACGGTAGCAATGTGAAGCGTGAAAATAGCGTTTCAACTGGATACTCCAAGCGACCTGATGAGGTTTGCAAGTCAAATCGCAAAAGGCTTAAGCCTGGAGAGAACCCCAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGGGCAAAATGTAGCATTGATGCACTTCTTGAACGGACCATTAAGCACATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAAACTGGGGATTCTAAGATTATTAATAAGGAAGGCGGATTGCTTCTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGTTCACAATCAATGGTTTGCCCTATCGTAGTTGAGGATCTGAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAAGAACGGGGTTTTTTTCTGGAGATTGCTGACTTGATCAGAGGATTGGGTTTGACCATTTTGAAGGGGGTTATGGAAGCTCAAAATGACAAGATCTGGGCACGCTTTGCTGTAGAGGCAAACAGGGACATAACAAGGATGGAGATATTCATGTCACTGGTTCAACTTTTGGAGCAAACAGTGAAGGGTAGTGCATCTACATCCAATGAAATTAACAACAACATGATGGTTTATCAGTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGGAGGCCTAGTTCGCGTCGCATGGCAGTTGGTGTTGTGATTCAGATATGTAGATACTGTAGGAAGTGGAAAGAAGGGGTTGCAGACAGTTTTTGTTCTGTGTTTCATGCTGCTGCTAACTTAGATATGGCTTTAAATGGGCGTAGGGAGGTGGATGCGGAGAAAAAGCAGTGTGAGACAGAAAATGGGATTTGA 3132 0.4259 MACRTLIAGNLDPERTRSGGLRTKQAGRGSSENLFVLLYSVVETMGFLLQEALKTMCGRNQWSYAVFWKIGCHNPKLLIWEECYYEPLPCPFPPHIDGIGTSNLSFGGGEGDRVCSLINRMMVNNSVNIVGEGIVGRAAFTGNHQWILLNSFTREAYPPEVYNDVHQQFSAGVQTVVVIPVLPHGIIQLGSFSAMMENIGFVNDVKSLILQLGCIPGVLLSEDYSAKASTEGLGATVTVGVPVSVDPRVVTSNCSPSVNGSNQQSNSSYTQGPIVQPSLPQRGDINNHQVSVLTHQNPNLTQVFSKYHDNVCQPKEIPITKPNFTRQLENRVVEAQVIPSNLGSCPQQPSFLYNSRSAFNELTGFGQSGLSDCSIKFMEQQILSGSGSQNYVNPNINAALNMTQLKANGGHILDHSQNSVSTSLLGGIPIHGGMSSLSRPTLVTSSFSKPPKAAATDFSGIHKAGTRLQNDDSTKAGDYSLPNLANQLGTSHMTLEVSDQKNLPMDLKCTHDKLARTDRKIDDDLLQAHKIPALQLEKHVSVSDQVPSFVNDCLNNVGANQSLRKQEACAQSSSGDDLFDVLGVDFKKKLLNGNWNKLLVDESDINAEILGKKTACKNMHSVDPDCYSVNEAMSDSDGFPWRGTDHLLDAVVSRAQSAVKQDSDDMSCKTTLTGISSASVPSSANRQVLSDHVLGGLFDFPKTKGKLGAAESGSLRSGCRKDDTGNGSQTTSIYGSQLSSWVENGSNVKRENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAQNDKIWARFAVEANRDITRMEIFMSLVQLLEQTVKGSASTSNEINNNMMVYQSFPQATQIPATGRPSSRRMAVGVVIQICRYCRKWKEGVADSFCSVFHAAANLDMALNGRREVDAEKKQCETENGI 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0558 1043 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 45 980 IPR043561 GO:0003700|GO:0006355
Glsi04g0558 1043 MobiDBLite consensus disorder prediction 745 759 - -
Glsi04g0558 1043 CDD bHLH_AtLHW_like 777 846 - -
Glsi04g0558 1043 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 86 IPR025610 -
Glsi04g0558 1043 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 118 208 IPR025610 -
Glsi04g0558 1043 MobiDBLite consensus disorder prediction 745 787 - -
Glsi04g0558 1043 MobiDBLite consensus disorder prediction 763 787 - -
Glsi04g0558 1043 MobiDBLite consensus disorder prediction 255 281 - -
Glsi04g0558 1043 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 773 822 IPR011598 GO:0046983
Glsi04g0558 1043 MobiDBLite consensus disorder prediction 709 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0558 Glsi-ChrGlsi04 3774449 3782214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0558 553 951 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.995 1.21e-120 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1504 14 15476277 15481958 Glsi04g0558 04 3774449 3782214 CCT