Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0543 ATGTCTTCCAATAAGAGAAGTCTTCTAAGAATCCTTCTCACTGCAAATGGAGGATGTGGGTGTGGCAAGCCCAAGCCCGCCGACGTCTACGAGCCCAGTCCAAAGCCCAAAACCCCCATTTATGATCAAAACCCGAAGTCCAGCAGCTTAACATCCTCAACCACCTCCGGCGCTGACGATGACGACGGAGATTTTACTTCCACCACCATTTCCGAAGCCGATACTAGTACTGATCACCACAACAAGAGTTCCAAGAATAATATCAATAATATCATACCGAAACAGAGCCCGAAACTCATGGATAGCGTGGCTATAGAGAAGGATTCGGAGGACCCGTACAAGGATTTTCGGCATTCGATGCTACAAATGATCTTTGAGAAAGAGATCTACTCGGAAGATGATCTTCAAGAGCTTCTCCAATGCTTCCTTCAGCTGAACTCGCCGAGCCAGCACGAAGTCATATGTAAAGCCTTCACGCAGATCTGCGAAGAGGCATTCCCTAATAACAAGGTTAGTTCTGGATCTTGCAGGAACAAGAAGATTTACAAGAACAGTGGTGAGTCATGA 567 0.4656 MSSNKRSLLRILLTANGGCGCGKPKPADVYEPSPKPKTPIYDQNPKSSSLTSSTTSGADDDDGDFTSTTISEADTSTDHHNKSSKNNINNIIPKQSPKLMDSVAIEKDSEDPYKDFRHSMLQMIFEKEIYSEDDLQELLQCFLQLNSPSQHEVICKAFTQICEEAFPNNKVSSGSCRNKKIYKNSGES 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0543 188 MobiDBLite consensus disorder prediction 40 74 - -
Glsi04g0543 188 MobiDBLite consensus disorder prediction 15 95 - -
Glsi04g0543 188 NCBIfam uncharacterized plant-specific domain TIGR01568 103 162 IPR006458 -
Glsi04g0543 188 Pfam Transcriptional repressor, ovate 109 164 IPR006458 -
Glsi04g0543 188 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Glsi04g0543 188 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 53 166 IPR038933 GO:0045892
Glsi04g0543 188 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0543 Glsi-ChrGlsi04 3697138 3697704 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi04g0543 Ovate 2.2e-23 No_clan