Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0542 ATGTCAGAAATGGATCCCAAATGGCAAATGCAGGGGCCCAACTCAGCAAGGGGGGTGGATTCATCGGCGAGAGGGGCCGAAGTGGTTGAATTCCAAGAGTGGGCGGTGCAGACTATGGAATCGGAGAATCCGTACGAGGATTTTCGGATGTCAATGGAAGAAATGATGATGGATTACGGGGTGAAGAAGGGCAACGAGGGAAGAGAATTGGAGTACCTAATGGATTTATTGGGATGTTACTTGAAGATGAATGAGAAGGAGAATCATAAACATATAATAGACGCCTTCGTCGATGTTTATGCCGCTTCCCCTTCCTCGTCGCAAGATTGGTGGGAGATTGACTTGCAGAGTTCTAATTCAAATGTAGGGAAGGGAAAAAGCCCCGATTACAATTGCTAA 399 0.4662 MSEMDPKWQMQGPNSARGVDSSARGAEVVEFQEWAVQTMESENPYEDFRMSMEEMMMDYGVKKGNEGRELEYLMDLLGCYLKMNEKENHKHIIDAFVDVYAASPSSSQDWWEIDLQSSNSNVGKGKSPDYNC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0542 132 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 36 102 IPR038933 GO:0045892
Glsi04g0542 132 Pfam Transcriptional repressor, ovate 41 100 IPR006458 -
Glsi04g0542 132 NCBIfam uncharacterized plant-specific domain TIGR01568 37 100 IPR006458 -
Glsi04g0542 132 ProSiteProfiles OVATE domain profile. 36 102 IPR006458 -
Glsi04g0542 132 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0542 Glsi-ChrGlsi04 3692489 3692887 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi04g0542 Ovate 1.9e-20 No_clan