Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0502 ATGGAATTATTATTTTCTTCTTGCATTTCATCTGCAATTGCAAATGGCCAAGTCTCTGTCCTTTCCTCTCCCACATCTTCCCTGTACAAAGATTCAAACTTCACAATAGGTGTGTCTGAGGATGCTGTTTCTGGTCATATTCAGTTACTTATTCCTGGTGAAACTGCTTGTTTTGCATGTGCACCTCCTCTGAGTCCGCAGGATGCAATTATACCTTTTCAGATTTTAGGGGGGGAAGCTCAGGTGGTTCAGATAATGTTGAAGCCACAAGAAAAAATCATTGCAAAGCCTGGTAAGATATTGGGCAGAGCGCACTCTTATGCATGGGCCTTGACTTCCCCCACTTTTATCGCATTTATCTTTCTTCACATATCGCATTTATCTGGATTCGTTGAAATGGATAATGTCTACCTTCCTGAAAATGAAGTAAGCATGTGGCAGTGGTTATTTGGCAAGACTATAACTAGCATTGTTCTTTGCAATCCTGGACCAAGTGATGGATTTGTTGGAATTGCCACACCTTCTCTTGGAAGAATTCTCCCGCCAGATGCTTTTCTTTGCTCTGTCAATGATGTGAAGGTTAGCAATACAGTTGATCAGAGGGGACGTAACGTAGCTGCTGGAGCTGAGGGTGACAATGCAGTAACGGCTCTTCTAATAGGGCCAGGCATTGTCTTCATACAGAGTTTACCTTTTCATCGACTCTCTCAGCGAATAGCTAGGGCAGTGACATCCCCAAACATGAGGGAAAATCCGAAGTTCTTCATTCAAATTGCTGTTTTCTTTTTTCTGGCATATGTCGTCATTACTAACATAATTCTCATATTTCTAACTCTGTTTTCAGATTGGTCTGTGCATATCCGTGGCCTTGAATTTGGAATTAACTACGGGCAGATAGCGAACAATCTACCTTCTCCTTCTCGTGTGGCAGTGCTTTTGAAATCTCTTAATGTCACCAGAATCAAACTCTATGATGCTGATCCCAATGTTCTTGTTGCCTTCTCGAACTCCAATGTTGAGTTCGTCATCGGACTTGGAAATGGGGATCTGCAGGATATGACAGACCCAGCTAAAGCTCAGGCTTGGATTCAACAACGAGTTCAGCCTTACGTCTCCCAGACTAAAATCACTTCCATCTTTGTAGGAAATGAGGTTTTAGGTAGCAACAATACCCAGCAAATGCAAAATCTTCTCCCGGCAATGCAAACTGTGCATGGTGCCCTTGTTAATCTTGGATTAGATCAAAAAGTTGCTGTCACAACCGCTCATTCTTTCAACATTTTAGCCACTTCTTACCCACCTTCATCTGGGGCTTTTAGGCAAGATCTAGTACAGCTTATCCAACCCCTTCTTGACTTTCATGCTCAAGTCAAATCACCCTTCTTGATCAATGCCTATCCCTTTTTTGCGTACAAGAGCAGCCCAAACGATATCTCATTGGACTATGTACTATTTCAGCCAAACCCAGGGATGGTTGACCCAAGTACAAATCTGCACTATGATAACATGCTATATGCTCAGATTGATGCTGTTTATGCAGCAATCAAAGCACTGGGGCATAGTGATATTGTTGTTCAGATTTCAGAGACCGGTTGGCCTTCTAAGGGTGATTCTGATGAGGTGGGAGCTACCATAGAGAATGCAAAATTATATAATGGGAATTTACTACAGAGGATAGAGCAGAAGCAAGGCACTCCCGCAAAACCTTCGGTTCCAATTGATATTTATGTCTTCGCACTGTTCAATGAGAATTTAAAGCCTGGTCCAGCTTCAGAGAGAAACTATGGCCTCTACTATCCAGATGGAACCCCAGTTTATAATGTTGGAGTACAGGGTAATTTCCCAGTGATGGTTGTACAATCACCATCCAAATCCACCGTCTTGTCTGGCAGTTTTCTTATCTATATTATAACATGCTTAGTTTCTGCTTGGGAGTTTTCAAGGTCGTGA 1950 0.4236 MELLFSSCISSAIANGQVSVLSSPTSSLYKDSNFTIGVSEDAVSGHIQLLIPGETACFACAPPLSPQDAIIPFQILGGEAQVVQIMLKPQEKIIAKPGKILGRAHSYAWALTSPTFIAFIFLHISHLSGFVEMDNVYLPENEVSMWQWLFGKTITSIVLCNPGPSDGFVGIATPSLGRILPPDAFLCSVNDVKVSNTVDQRGRNVAAGAEGDNAVTALLIGPGIVFIQSLPFHRLSQRIARAVTSPNMRENPKFFIQIAVFFFLAYVVITNIILIFLTLFSDWSVHIRGLEFGINYGQIANNLPSPSRVAVLLKSLNVTRIKLYDADPNVLVAFSNSNVEFVIGLGNGDLQDMTDPAKAQAWIQQRVQPYVSQTKITSIFVGNEVLGSNNTQQMQNLLPAMQTVHGALVNLGLDQKVAVTTAHSFNILATSYPPSSGAFRQDLVQLIQPLLDFHAQVKSPFLINAYPFFAYKSSPNDISLDYVLFQPNPGMVDPSTNLHYDNMLYAQIDAVYAAIKALGHSDIVVQISETGWPSKGDSDEVGATIENAKLYNGNLLQRIEQKQGTPAKPSVPIDIYVFALFNENLKPGPASERNYGLYYPDGTPVYNVGVQGNFPVMVVQSPSKSTVLSGSFLIYIITCLVSAWEFSRS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0502 649 SUPERFAMILY (Trans)glycosidases 292 608 IPR017853 -
Glsi04g0502 649 Pfam Mitochondrial biogenesis AIM24 73 229 IPR002838 -
Glsi04g0502 649 FunFam Glucan endo-1,3-beta-glucosidase 14 290 614 - -
Glsi04g0502 649 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 277 611 IPR044965 GO:0004553|GO:0005975
Glsi04g0502 649 SUPERFAMILY TRAP-like 71 249 IPR016031 -
Glsi04g0502 649 Pfam Glycosyl hydrolases family 17 293 608 IPR000490 GO:0004553|GO:0005975
Glsi04g0502 649 Gene3D Glycosidases 291 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0502 Glsi-ChrGlsi04 3423979 3433681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0502 342 644 Glycoside Hydrolase AT2G27500 64.803 5.84e-147 427