Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0498 ATGTATAGATTCATCCATCAGAATCTGCTTCATAAACCAAGGCACAAGTCAAGGGAGAGGCAAGTGGTCCTCTGCTGTGCCCCATGGGAAGCATCTTCCCACAATGATTTTTTATCTTTTCTTGCATGGATTGCTCCAGAGTTTCAAGATGCTCTAAACCCATCAGGTGGGATGTACCATCATCACCAACATCAAGGAAAGAACATCCACTCTTCTTCCAGGATGTCAATCCCGTCCGAGAGGCATATGTTCCTTCAAACCGGAAATGGGTCAGCTGATTCTGGACTCGTCCTCTCGACTGATGCTAAGCCTAGATTGAAGTGGACACCAGATCTTCATGCGAGGTTTATAGAAGCAGTCAATCAGTTAGGCGGAGCTGACAAGGCAACTCCCAAAACTGTTATGAAACTCATGGGGATTCCAGGGCTTACCTTATATCATCTAAAGAGCCATCTTCAGAAATACAGATTGAGCAAGAATCTGCATGGACAAAGTAACAACGTGACACACAAAATCAGTGTAGCAACTGGAGAAAGACTTTCTGAAACAAATGGCACTCATATGAACAATTTGAGCCTTGGGCCGCAGCCTAACAAAGAATTACATATAAGCGAGGCGCTGCAGATGCAGATTGAGGTACAGAGAAGGCTAAACGAGCAACTTGAGGTACAGAGGCACTTGCAGCTCCGCATAGAGGCCCAAGGGAAATACCTGCAGGCTGTGCTCGAGAAAGCCCAGGAAACACTTGGTAGGCAGAATTTGGGGATAGTAGGACTTGAAGCGGCTAAAGTTCAACTCTCAGAGCTCGTGTCCAAAGTATCCTCACAGTGCCTGAATTCTGCATTTTCAGAACTGAAGGAATTACAAGGATTTTGCCCCCAGCAAACACAAAATAACCAGCCGACCGACTGCTCAATGGACAGCTGCATCACATCCTGCGAGGGATCTCAAAAGGAGCAAGAGATACAAAATGGGGGGATGGGTTTACGACCCTTCAATGACCGTACATTCATGGAACGAAAGGAAGTCATGGAAGCACCCATCCTGCGGAACTCTGAACTCAAATGGTGCGATGAAGTAAAAAAGAACACCTTTCTTAACCCATTGGGCAAGAATGCTGAACGAAGAAGTTATGCCGTTGAAAGAAGTCCTGGTAACTTATCTATGAGCATTGGACTGGAACGAGAAACAGACAATGGCACCAGCATGTATCCTGACAGAATGATCATGGGAAGATCAGAAAGAGATAGTGAATTCCAACACCGAAACAGCAGTAAGCCAGAATCAATGAAATCAGTGGACGAAAAAGTTTCTCAAGATTATAGATTGCCTTACTTTGCATCAGCGAGACTGGACCTAAACACCCGTGAAGAAAACGATGCTGCAATGAACTGTAAACAACTGGACTTGAATGGATTCAGTTGGAGCTGA 1431 0.4521 MYRFIHQNLLHKPRHKSRERQVVLCCAPWEASSHNDFLSFLAWIAPEFQDALNPSGGMYHHHQHQGKNIHSSSRMSIPSERHMFLQTGNGSADSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKISVATGERLSETNGTHMNNLSLGPQPNKELHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQTQNNQPTDCSMDSCITSCEGSQKEQEIQNGGMGLRPFNDRTFMERKEVMEAPILRNSELKWCDEVKKNTFLNPLGKNAERRSYAVERSPGNLSMSIGLERETDNGTSMYPDRMIMGRSERDSEFQHRNSSKPESMKSVDEKVSQDYRLPYFASARLDLNTREENDAAMNCKQLDLNGFSWS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0498 476 NCBIfam myb-like DNA-binding domain, SHAQKYF class 103 158 IPR006447 GO:0003677
Glsi04g0498 476 Coils Coil 204 224 - -
Glsi04g0498 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 160 IPR017930 -
Glsi04g0498 476 MobiDBLite consensus disorder prediction 411 436 - -
Glsi04g0498 476 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 65 392 IPR044848 GO:0003700
Glsi04g0498 476 Pfam MYB-CC type transfactor, LHEQLE motif 202 248 IPR025756 -
Glsi04g0498 476 SUPERFAMILY Homeodomain-like 102 158 IPR009057 -
Glsi04g0498 476 Gene3D - 102 160 - -
Glsi04g0498 476 FunFam Myb family transcription factor 102 160 - -
Glsi04g0498 476 Pfam Myb-like DNA-binding domain 105 156 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0498 Glsi-ChrGlsi04 3382075 3385616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0498 135 476 G2-like Transcription Factor Family AT3G04030 52.754 1.35e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi04g0498 Myb_DNA-binding 4.4e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1553 14 15927705 15930011 Glsi04g0498 04 3382075 3385616 CCT