Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0494 ATGGTAGTTTCTGAGGCAGAAACTGTCGTTGATTATGACAACCTTACCGAAGAATTACCACCTTCATCTCCTCCCCTGCCTCCACCGAAGCCAGAGCAAGAAGCGTCATCAAGGGAATCCACATTTGCTCCACTGAGTAAACAGAACTCAATACTCTCACTCACCCTTGACGAAATACAATGCAGGAGTGGGATGAGATTTGGGTCCATGAGCATGGATGAATTCCTGGCCAGCATTTGGTGTTCTGATGATGACAAAGTCAACTCACAAGATGACGATTCTGCTCAAATTAAAAATGTAGTAAAAGAACCCACCATTTCCTCACAGGCCTCATTCTCTCTCCCTCCTCCAATTTGCAAGAAAACTGTGGACGAAGTCTGGTCTGAGATCCACGAAGATCACCAGCCACAACAAAACGAAGCTAATAACCTTACCAAGAATGAAACTCTTAAAAAGGAACAAACATTTGGGGAGATGACGTTGGAGGATTTCCTAATAAAAGCCGGGGTAATACAAAAATCCTCATTACCATTCAAGTCGTCTTCTCCTCAACCAAAACCTGACCTTCCACTTCAGAATCAAACTAGAAACATTGCAATGGGGTTAGGGTTTTCCGCCCAACAAAATGCGGGAAGCTGTGTGAGAAGCAATGGACTGGCCGAAGCATACTCAGTGTTCTTACAGAGCAGTGGGTCAGTGGTGGGAGACCCCACTAGCGGTGGTACGGTTCAGAAATGCCAAGGCTTTACGGAAACAAGCGGGGTTAGTGGTAGGAAGAGAATAATTGATGGTCCTCCAGAAGTGGTGGTGGAGCGGAGGCAGCGCAGAATGTTGAAGAATCGAGAATCAGCAGCACGTTCTCGAGCAAGGAGACAGGCATATACGGTGGAGTTAGAAGCAGAGCTAAATCATCTAAGAGAAGAGAACGAAGAGCTAAAGCAAATGCTGGTTGAAAATGAGCGAAAGAGAAAACAAGAGCCTCGTGGAATTCCCGGAGTTGAGAAATTCAATTTGACTTTGGGTAAATAA 1029 0.4538 MVVSEAETVVDYDNLTEELPPSSPPLPPPKPEQEASSRESTFAPLSKQNSILSLTLDEIQCRSGMRFGSMSMDEFLASIWCSDDDKVNSQDDDSAQIKNVVKEPTISSQASFSLPPPICKKTVDEVWSEIHEDHQPQQNEANNLTKNETLKKEQTFGEMTLEDFLIKAGVIQKSSLPFKSSSPQPKPDLPLQNQTRNIAMGLGFSAQQNAGSCVRSNGLAEAYSVFLQSSGSVVGDPTSGGTVQKCQGFTETSGVSGRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNHLREENEELKQMLVENERKRKQEPRGIPGVEKFNLTLGK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0494 342 SMART brlzneu 268 321 IPR004827 GO:0003700|GO:0006355
Glsi04g0494 342 MobiDBLite consensus disorder prediction 1 47 - -
Glsi04g0494 342 Coils Coil 291 325 - -
Glsi04g0494 342 Gene3D - 270 326 - -
Glsi04g0494 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 270 316 IPR004827 GO:0003700|GO:0006355
Glsi04g0494 342 SUPERFAMILY Leucine zipper domain 272 316 IPR046347 GO:0003700|GO:0006355
Glsi04g0494 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 275 290 IPR004827 GO:0003700|GO:0006355
Glsi04g0494 342 MobiDBLite consensus disorder prediction 319 342 - -
Glsi04g0494 342 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 45 318 IPR043452 GO:0003700|GO:0045893
Glsi04g0494 342 Pfam bZIP transcription factor 272 318 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0494 Glsi-ChrGlsi04 3338232 3341975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0494 44 326 bZIP Transcription Factor Family AT3G44460 46.575 1.80e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi04g0494 bZIP_1 1.1e-09 CL0018