Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0476 ATGAGGGCCCGGCATCGCAATTCCCAACCATTTCTGAGAGCAAAGATGAAAGTGGTCGCTGCGTTTTTGCTGGCCGTTTTGGGAGGGAACACGTCCCCTTCTGCTGATGATCTGAAGGATATCCTTGTTTCAGTTGGGGTTGAGGTTGACGATGAGAGAATTGAGTTGCTCTTAAATGAAGTTAAGGGCAAGGATATCACCGAGTTAATTGCTGCTGGAAGGGAAAAGTTGGCTTCAGTACCATCCGGCGGAGGTGCAGTTGCCGCTGTTGCCGCATCAGTAGGCGGTGGTGCAGCTGGCAGTGCTGCTGCACCTGCAGAGGCAAAGGAGGAGAAGAAGGTAGAAGAGAAAGAGGAGTCCGATGAGGACATGGGTTTCAGTTTATTCGACTAA 393 0.5089 MRARHRNSQPFLRAKMKVVAAFLLAVLGGNTSPSADDLKDILVSVGVEVDDERIELLLNEVKGKDITELIAAGREKLASVPSGGGAVAAVAASVGGGAAGSAAAPAEAKEEKKVEEKEESDEDMGFSLFD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0476 130 CDD Ribosomal_P2 16 130 IPR044076 GO:0002182|GO:0003735|GO:0022625
Glsi04g0476 130 Pfam 60s Acidic ribosomal protein 32 129 - -
Glsi04g0476 130 Gene3D - 15 74 IPR038716 -
Glsi04g0476 130 MobiDBLite consensus disorder prediction 98 130 - -
Glsi04g0476 130 FunFam 60S acidic ribosomal protein P2 13 74 - -
Glsi04g0476 130 Hamap 50S ribosomal protein L12 [rpl12]. 17 130 IPR027534 GO:0003735|GO:0005840|GO:0006414
Glsi04g0476 130 MobiDBLite consensus disorder prediction 106 120 - -
Glsi04g0476 130 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 16 130 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0476 Glsi-ChrGlsi04 3193805 3195760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0476 16 130 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.957 1.52e-33 111