Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi04g0442 | ATGGCGGAGGACCGAAACGGCGATAGGAATGAGGGAAGTGATTTCAGTTCTGAGGACGAAGGGACCGAGGATTATAGGCGAGGGGGATATCATGCGGTTCAAATTGGAGATACATTCAAAAATGGGTGCTATGTGGTGCAGAGCAAGCTGGGCTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGATATCCAGAGATCGCGTTATGTAGCCCTAAAAATTCAGAAGAGTGCCCAGCACTACACTGAAGCTGCGATGGACGAAATAAAGATTCTTAAACAGATTGCAGAGGGGGACCCAGATGACAAGAAATTTGTAGTAAAGCTTTTGGATCACTTCAAGCATGCAGGGCCCAATGGTCAGCATGTGTGTATGGTTTTTGAATTTCTGGGTGACAATCTTCTGACCCTTATCAAGTATAGTGATTACCGAGGGATTCCTCTCTCCATGGTTAAAGAAATTTGTTTCTATATTTTGGTGGGATTGGATTACTTGCATCGTGAGCTATCTGTAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCAATGATAGATCCATTCAAGGATCCTAGAAAAACAGGTGTTCCACTTATCCAGCCAAACACCAAGGATAAGACTACGTCAAAAAATGGGATCACAAAAGACAATAATAGTTCAAATGGAGATCTGACCAAGAACCAGAAAAAGAAATTGCGTAAAAAGGCTAAGAAGGCAGCTCGAAGTTGTGCTGAGAAGGAAAGTCCCAAGGAAGGTGAGGAAGATTCTAAACCACCTGACCAAGAAAATTCTAGTAATGATGTGAAATCCATTGCAGAATTTGTTGAAGATAAACCTAATAGCCCTGTCAGTAAAGATGAATCAATAGAGGTTGTTGAAACTAAGGATATTCCTGAAGGAAGTCATAGTCACCAGAGAAGTAGTCACACCATGAGAAATAAACTGCTTGCAGCCGTTGATCTTAAATGCAAGCTGGTTGATTTTGGAAATTCTTGTTGGACTTATAAGCAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGATCTAAATATTCAACTCCAGTTGATTTATGGTCATTTGCCTGCATTTGCTTTGAGCTCTCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGACCACTATGATAAAGATGAGGATCATTTGGCATTGATGATGGAGCTTCTTGGAATTATGCCTCGCAAGATTGCACTAGGTGGCCGCTATTCTCGCGAGTTTTTTAATAGATATGGTGATTTAAAGCACATCCGTCGGTTGCGTTTCTGGCCTCTCAGTAAGGTTCTGATGGAGAAGTATGATTTCAGTGAGCAAGATGCAAATGACATGGCTGCCTTCCTTGTTCCGTTACTTGATTTTGCCCCTGAAAAGAGGCCAACAGCAGCTCAGTGCCTTAATCATCCATGGATCAGTGCAGGTCCTCGGATTCTTGAGCCCTCAGTGACATCTGTGCAACCTGAGGCCACAAACGGGGGAATGTCTGAAAATATGAAGAGGGAAAAGGCTGAGCTGGAGGCAGTGGAAGTTAGCATGGGGAACATGGCTATTGACGGAACTACAAACCCACTTAAAGAGTCCCAACCAATGAAGTCACCTAAATAG | 1647 | 0.4305 | MAEDRNGDRNEGSDFSSEDEGTEDYRRGGYHAVQIGDTFKNGCYVVQSKLGWGHFSTVWLAWDIQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKFVVKLLDHFKHAGPNGQHVCMVFEFLGDNLLTLIKYSDYRGIPLSMVKEICFYILVGLDYLHRELSVIHTDLKPENVLLLSMIDPFKDPRKTGVPLIQPNTKDKTTSKNGITKDNNSSNGDLTKNQKKKLRKKAKKAARSCAEKESPKEGEEDSKPPDQENSSNDVKSIAEFVEDKPNSPVSKDESIEVVETKDIPEGSHSHQRSSHTMRNKLLAAVDLKCKLVDFGNSCWTYKQFTNDIQTRQYRCPEVILGSKYSTPVDLWSFACICFELSTGDVLFDPHSGDHYDKDEDHLALMMELLGIMPRKIALGGRYSREFFNRYGDLKHIRRLRFWPLSKVLMEKYDFSEQDANDMAAFLVPLLDFAPEKRPTAAQCLNHPWISAGPRILEPSVTSVQPEATNGGMSENMKREKAELEAVEVSMGNMAIDGTTNPLKESQPMKSPK | 548 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi04g0442 | 548 | FunFam | CMGC/SRPK protein kinase | 30 | 129 | - | - | |
Glsi04g0442 | 548 | Pfam | Protein kinase domain | 318 | 485 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi04g0442 | 548 | Pfam | Protein kinase domain | 44 | 184 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi04g0442 | 548 | MobiDBLite | consensus disorder prediction | 242 | 264 | - | - | |
Glsi04g0442 | 548 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Glsi04g0442 | 548 | MobiDBLite | consensus disorder prediction | 202 | 227 | - | - | |
Glsi04g0442 | 548 | Gene3D | Transferase(Phosphotransferase) domain 1 | 127 | 486 | - | - | |
Glsi04g0442 | 548 | MobiDBLite | consensus disorder prediction | 194 | 268 | - | - | |
Glsi04g0442 | 548 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 496 | IPR011009 | - | |
Glsi04g0442 | 548 | PANTHER | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED | 15 | 505 | - | - | |
Glsi04g0442 | 548 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 126 | - | - | |
Glsi04g0442 | 548 | SMART | serkin_6 | 44 | 485 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi04g0442 | 548 | ProSitePatterns | Protein kinases ATP-binding region signature. | 50 | 73 | IPR017441 | GO:0005524 | |
Glsi04g0442 | 548 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 171 | 183 | IPR008271 | GO:0004672|GO:0006468 | |
Glsi04g0442 | 548 | CDD | STKc_SRPK | 33 | 485 | - | - | |
Glsi04g0442 | 548 | FunFam | Serine/threonine-protein kinase SRPK-like protein | 315 | 485 | - | - | |
Glsi04g0442 | 548 | ProSiteProfiles | Protein kinase domain profile. | 44 | 485 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi04g0442 | Glsi-ChrGlsi04 | 2951317 | 2955227 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi04g0442 | 1 | 534 | EF-hand Containing Proteins | AT5G22840 | 65.562 | 0.0 | 711 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_SRPK | Glsi04g0442 | Pkinase | 1.6e-20 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi14g1619 | 14 | 16564355 | 16567614 | Glsi04g0442 | 04 | 2951317 | 2955227 | CCT |