Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0401 ATGGGGGCCCTGGCTTCTTTTACAACGTCGTTCCTTAACGGCGAGAGAGCCGTTGTTCTCTTCTTCATCTCTATGGTCCTCTACTCCCTCCCTCTCTCTCTTCTCTTCCACGGCTTTGCTCTCTCCCTCCTCACTCTTGCCTCCCTCTTCCTCGAAATCCGCTTCGACACCTCCAATTCCCTCTCCCTTTTCCGCATCAGGCCCGGTGTTCCCTCTGGAATACTGCTTGGGGCGGTGACTCTGCCGACGGTTATTCTGTCAAAGTTGATACAGCTATCAAGAGGATTGTCACTGGCTGAAGTAAAATTTGAAGAGATTCAGTATCTGACATTGCAATACTGGGCCACATCTGCCAGCTGCTTGAGTGTGCTCATATTCCTCAGCTTGATTCTATGGCGTGCACCATTTTCACGGAATGACTGGGGTCTCAGGTTTAGCTTATGTTTCATTTTCTTGCAAGCTGTTGTCTGCTGTGTGTTCCTCGCTGCAACATCTCAAGGTGGTTTGCACCCAACACTGAAACTGTCCTGGGTCATTTGTCATGGATTGGCAGCAGTGAAGTTAATTCAATATTTTCTCAGAACTTTCCCATCTTGTGCTTCCATTGGGGAAGCACTTCTGGTGACTGCAGGTATTGTTCTCTATTTTGGTGACATGTTGTTGCATACTATTGGCAAGCTATCTGGAATTTTTATGTCATCGGAGTTGCTTTCTACAGAATATGGAACCAGTCGAAGTGAGATAAGCATTATTACTCAGGGACTGTTGCTTGGCCTTCTACTATATCCATTATCTTTCAAATATATTATCCAAATATGGGAATGGTTCATAAACACAGCTTCTGATGAAGCAAGAAGATACAATGACATCGGAAGATCTCTTATATTTTTTGCTTCCCTTGGATTGATCATGATTGTGATTGTACCATCATGGATGCAGTTTGTTCAGGAGTTTCATATGCATCCAGTTTTTTGGGTGTTTTCTTTTGTTTTCTCAGAGCCAGTCAAAAGACTTTCATTGTGTATTTACTGGGTTTGTGTTATCTGTGTTTCGGTTTTGCGATTCTATAACATTTCGAAGAACAGTAAGATTGAGAGAATTCTTTTGCGAAAGTACTACCATCTGTTGGCTGTCTTGATGTTTTTGCCTGCTCTTGTCTTCCAGCCAAAGTTTCTTGATCTAGCTTTTGGTGCAGCTTTGGCGGTTTTCTTGACATTAGAAATTATTCGAGTGTGGAGAATCTGGCCTTTGGGACAATCGATACATCAATTTATGAATGCATTCACCGACCATCGTGACTCTGATCTTCTTATTGTTAGCCATTTCTCACTCTTACTGGGATGTGCACTTCCCATTTGGATGTCCTCTGGGTACAATGATCGACCTCTGGCCCCTTTTGCAGGAATATTAAGTTTGGGAATTGGAGATACAATGGCATCAATGGTTGGGCACAAATATGGTGTTCTAAGGTGGAGCAAAACTGGCAAGAAAACCATTGAAGGTACGGCAGCTGGTATCACATCTGTCCTGGCTGCTTGCTCATTGCTCCTTCCACTTTTAGCATCAACTGGATATATTTTTACCCAGCATTGGTTCTCTCTACTTCTAGCTGTGACTCTAAGTGGTTTATTGGAGGCCTACACAGCACAACTTGACAACGCATTCATACCACTCTTCTTTTATAGTCTTCTCTGTTTCCTAGTTAGCTCAAGGATGCGTCAATTGTTCGCAAATGGCCCTCCTCTACTGTTTCACATCCAAATCATATTGGGAATCAATTACAGCACCCAAAAATATCAGCTTTTGCGTGCTGGGTCCACAATGGACCCAGGAAAACAGAAAATAAGGAAGGCCATTCATTCATTCATTTCATCTGATTGTTTTGACCACATGGGGATTATGGAGGTTACCTCCCCTCCCTTAGTAAAAGCAAGAAATAGCAGTAGCAAAAAGAAAGGTGGAATTGTGAAGCTAAAGATTGTTGTTGAGAAGCTGCAGAAGAGTCTCTTACTGGGTAGGAAATCAACCTGTGTCCCGGCAGATGTTAAAGAAGGACATTTTGCAGTGATTGCTGAGTATGGTGAGGAACCAAAGAGATTTGTGGTGCCACTAAGCTGTCTGACCCAACCAACATTTTTGAGGCTATTGGAGCAAGCAGCCGAAGAGTATGGGTTTGATCAAGAAGGTGCAATAACCATTCCTTGCAGGCCTTGCGAGCTCGAGAGAATATTGGCCCAGCAATGGCAGGAAGAGAAGGGAGACTCTGAACGTGAAAGTACTGGCGTTAGCTGGAATTCTCGTAAAGCCATGGTTCAAAGCTACTGA 2325 0.4357 MGALASFTTSFLNGERAVVLFFISMVLYSLPLSLLFHGFALSLLTLASLFLEIRFDTSNSLSLFRIRPGVPSGILLGAVTLPTVILSKLIQLSRGLSLAEVKFEEIQYLTLQYWATSASCLSVLIFLSLILWRAPFSRNDWGLRFSLCFIFLQAVVCCVFLAATSQGGLHPTLKLSWVICHGLAAVKLIQYFLRTFPSCASIGEALLVTAGIVLYFGDMLLHTIGKLSGIFMSSELLSTEYGTSRSEISIITQGLLLGLLLYPLSFKYIIQIWEWFINTASDEARRYNDIGRSLIFFASLGLIMIVIVPSWMQFVQEFHMHPVFWVFSFVFSEPVKRLSLCIYWVCVICVSVLRFYNISKNSKIERILLRKYYHLLAVLMFLPALVFQPKFLDLAFGAALAVFLTLEIIRVWRIWPLGQSIHQFMNAFTDHRDSDLLIVSHFSLLLGCALPIWMSSGYNDRPLAPFAGILSLGIGDTMASMVGHKYGVLRWSKTGKKTIEGTAAGITSVLAACSLLLPLLASTGYIFTQHWFSLLLAVTLSGLLEAYTAQLDNAFIPLFFYSLLCFLVSSRMRQLFANGPPLLFHIQIILGINYSTQKYQLLRAGSTMDPGKQKIRKAIHSFISSDCFDHMGIMEVTSPPLVKARNSSSKKKGGIVKLKIVVEKLQKSLLLGRKSTCVPADVKEGHFAVIAEYGEEPKRFVVPLSCLTQPTFLRLLEQAAEEYGFDQEGAITIPCRPCELERILAQQWQEEKGDSERESTGVSWNSRKAMVQSY 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0401 774 MobiDBLite consensus disorder prediction 759 774 - -
Glsi04g0401 774 MobiDBLite consensus disorder prediction 749 774 - -
Glsi04g0401 774 PANTHER TRANSMEMBRANE PROTEIN 15-RELATED 18 567 IPR032974 -
Glsi04g0401 774 Pfam Auxin responsive protein 674 745 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0401 Glsi-ChrGlsi04 2624708 2634986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0401 649 745 Calmodulin-binding Proteins AT4G34750 37.113 3.98e-13 65.9