Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0399 ATGTATGGAAGATTGAACATGATGGAAGAAATACAGTCTCAATCAGATAATTATAGGTCTTCATCATCATCGGCAAGCAGCCCAGCAAGTAGGGTGCCATCCAGTAACTTCTTCTACCTGCGTAAACCGGGTTCACTCAAACAACCTATCTCATTTGAGGATTCACCTGAGTGGGATGATACTGATATTGATGTTAAAGTTGATGGAGGAGCTGAGTCTATTAATATTGCAACAACGCCTGGTTCCCCTTCTCTTTCAAAGCTCAACAGTGGGTCCTTGCCATCCCCACATCTACCAGAAGGTGCTGTTATTCCCCAAAAAATTTCAGGGGCTTCCGTTGTCTGGAAGGACTTGACTGTTACTATAAAGGGAAAAAGGAAGTACTCTGATAAGGTTGTTAAGAGTTCAACTGGTTATGCATTACCTGGAACAATGACAGTAATTATGGGTCCTGCTAAATCAGGGAAATCTACATTATTACAAGCCATTGCAGGAAGGTTGCATCCTTCTGCCAGAATGTACGGTGAGGTGTTTGTGAATGGGGCAAAATCACACATGCATTATGGGTCATATGGGTTTGTGGAAAGAGAAACCACTCTGATTGGATCCCTCACTGTGAGGGAGTTTCTGTATTATTCAGCCCTGCTTCAACTTCCTGGTTTCTTTTGTCAGAAAAAGAGTGTGGTAGAGGATGCTATCCATGCAATGTCTTTAGGTGATTACGCAAATAAACTCATTGGTGGACATTGCTATATGAAGGGCCTTCCCAATGGGGAGAGAAGCCGTGTTAGCATTGCCAGGGAGCTTGTTATGAGACCGCAAATCTTATTTATAGATGAGCCTCTTTATCGTCTGGACAGTGTCTCTGCACTCTCGATGATGGTTACATTGAAGAAACTTGCAAGCACTGGTTGCACTCTTCTTTTCACCATTTATCAGAGTAGCACAGAAGTCTTTGGCCTTTTTGACCGAATCTGTCTGCTTTCAAATGGAAATACCCTGTTCTTTGGAGAAACATTAGCCTGCTTGCAGCACTTCGCAAATGCTGGATTTCCTTGCCCAATCATGCAAAGTCCTTCTGATCACTTCCTACGCGCAATTAATACAGAGTTTGACAGGATAATTGCAATGTGTAAAAACTGGCAGGATGACAATGGCGATTTTTCCTCAGTAAACATGGACACTGCTGTTGCTATACGCACACTGGAAGCAACTTATAAATCATCCACAGATGCGGCTGCTGTTGAAACTATGGTTTTGAAACTCACTGAGAAGGAAGGTCCAGCTCTCAAAAGCAAAGGCAAGGCTGGCAATGCTACTCGAATAGCAGTCTTGACATGGAGGTCTTTATTAGTTATGTCAAGGGAGTGGAAATATTACTGGCTTCGTCTTATTCTTTATATGCTTCTCACACTCTGTATTGGTACTGTATTTTCTGGTTTGGGGCATTCTCTGTCATCAGTTGTGACAAGAGTTGCAGCAATTTTTGTATTTGTGTCATTCTGTTCACTTTTAAGTATTGCTGGGGTGCCTGCACTTATGAAAGAAATCAAGATATATGTCTGTGAAGAATCAAACCAGCACTCCGGTGCACTAGTGTTTTTACTTGGGCAACTCTTCTCCAGCATCCCATTCCTGTTTCTCATAGCCATTTCATCAAGTCTAGTCTTCTATTTCTTAATAGGGCTGCGAGATGAGTTCAGCTTGTTAATGTACTTTGTGCTGAACTTTTTCATGTCTTTGTTAGTGAATGAAGGACTTATGCTAGTCGTCACCACTTTATGGCTAGATGTTTTTTGGAGTGTCTTGACACTGTTATGCATACACGTGGTCATGATGCTTTCTGCAGGGTATTTTAGAATTCGAAACACAATGCCTGAACCGGTGTGGATATATCCGATGTCCTATATAGCCTTCCACACTTACTCTATTCAGGGGCTATTGGAGAATGAGTATCTAGGCACATCCTTTGCGGTTGGGCAGGTAAGGACCATATCTGGGTTTCAAGCCCTCCAAAGTGCGTACAATATCTCCCCTGACAATGATTCCAAGTGGGAGAATTTGCTGGTTTTGTTTCTTATGGCAGTTGGTTATCGAATTTTCATGTTTGTTGTATTACGTTTCTGCTTAGGGAGAAAAAAATCCTTGCTAAAAGGCTTTCATTGTCGTCGGAATACGACGGATACAAGATGA 2193 0.4213 MYGRLNMMEEIQSQSDNYRSSSSSASSPASRVPSSNFFYLRKPGSLKQPISFEDSPEWDDTDIDVKVDGGAESINIATTPGSPSLSKLNSGSLPSPHLPEGAVIPQKISGASVVWKDLTVTIKGKRKYSDKVVKSSTGYALPGTMTVIMGPAKSGKSTLLQAIAGRLHPSARMYGEVFVNGAKSHMHYGSYGFVERETTLIGSLTVREFLYYSALLQLPGFFCQKKSVVEDAIHAMSLGDYANKLIGGHCYMKGLPNGERSRVSIARELVMRPQILFIDEPLYRLDSVSALSMMVTLKKLASTGCTLLFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFANAGFPCPIMQSPSDHFLRAINTEFDRIIAMCKNWQDDNGDFSSVNMDTAVAIRTLEATYKSSTDAAAVETMVLKLTEKEGPALKSKGKAGNATRIAVLTWRSLLVMSREWKYYWLRLILYMLLTLCIGTVFSGLGHSLSSVVTRVAAIFVFVSFCSLLSIAGVPALMKEIKIYVCEESNQHSGALVFLLGQLFSSIPFLFLIAISSSLVFYFLIGLRDEFSLLMYFVLNFFMSLLVNEGLMLVVTTLWLDVFWSVLTLLCIHVVMMLSAGYFRIRNTMPEPVWIYPMSYIAFHTYSIQGLLENEYLGTSFAVGQVRTISGFQALQSAYNISPDNDSKWENLLVLFLMAVGYRIFMFVVLRFCLGRKKSLLKGFHCRRNTTDTR 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0399 730 MobiDBLite consensus disorder prediction 1 33 - -
Glsi04g0399 730 Pfam ABC-2 type transporter 442 652 IPR013525 GO:0016020|GO:0140359
Glsi04g0399 730 Gene3D - 106 350 IPR027417 -
Glsi04g0399 730 SMART AAA_5 142 332 IPR003593 GO:0016887
Glsi04g0399 730 Pfam ABC transporter 142 282 IPR003439 GO:0005524
Glsi04g0399 730 MobiDBLite consensus disorder prediction 8 33 - -
Glsi04g0399 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 108 708 - -
Glsi04g0399 730 FunFam ABC transporter G family member 3 106 350 - -
Glsi04g0399 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 347 IPR027417 -
Glsi04g0399 730 CDD ABCG_EPDR 110 337 - -
Glsi04g0399 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 113 355 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0399 Glsi-ChrGlsi04 2608188 2614153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0399 65 316 Calmodulin-binding Proteins AT2G36910 23.420 1.81e-06 49.7