Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0395 ATGGCAGATAGTGAGGGATTGCCAGGAAGCTCCATGCATGGAGTGACAGGCAGAGAGCAAACCTTCGTAGCCTCAGTTGCTTCCCCAATGGTCCCAACTGATACCACAGCTAAATTTGCTCTCCCAGTTGATTCTGAGCACAAGGCCAAAGTGTTCAAACTCTTCTCATTTGCCAAACCCCACATGAGAACCTTCCACCTATCTTGGATTTCCTTCTTCACTTGCTTTGTTTCAACCTTCGCTGCAGCTCCACTTGTCCCTATCATTCGTGACAACCTCAACCTCACCAAGTTTGACATTGGGAATGCTGGGGTTGCCTCTGTTTCCGGCAGTATCTTCTCTAGGCTTGTAATGGGTGCAGTTTGTGACCTATTAGGCCCCCGTTATGGCTGTGCCTTCCTTATTATGCTCTCAGCCCCTACTGTTTTCTGCATGTCCTTTGTGAAAGATGCTTCTGGGTACCTAGTTGTTCGGTTCTTGATTGGGTTCTCTTTGGCCACTTTTGTTTCATGCCAATACTGGATGAGCACCATGTTTAACAGTAAGATTATAGGGCTGGCCAATGGGACAGCAGCTGGGTGGGGAAACATGGGTGGTGGAGCCACTCAGCTTATAATGCCATTGGTTTATGAGTTGATCAAAAAAGCTGGAGCTACTCCCTTCACTGCCTGGAGGATCGCCTTCTTCTTCCCAGGCTGGTTGCATGTGATCATGGGGATCCTGGTCTTAACTCTTGGCCAAGACTTGCCTGATGGAAACCTCGGTGCCTTACAGAAGAAGGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTGCTGTGGTATGCCATAACAAATTACAGGACATGGATTTTTGTCCTTCTCTATGGCTACTCTATGGGAGTTGAATTAACCACTGACAATGTCATTGCTGAGTATTTCTTTGACAGGTTTGATCTTAAGCTGCACACTGCTGGAATCATTGCTGCTACATTTGGAATGGCTAACCTCGTTGCTCGTCCATTCGGAGGATATGCTTCGGATGTAGCAGCTCGCTTGTTTGGCATGAGAGGCAGGCTTTGGGTCCTCTGGATCCTCCAAACCTTAGGTGGGGTTTTCTGCATATGGCTTGGGCGTGCCAACTCGCTTCCTATTGCTGTCTTGTCAATGATTCTCTTTTCCGTTGGAGCTCAAGCTGCTTGTGGTGCAACCTTTGGCATAATCCCGTTCATTTCAAGGCGTTCTCTGGGGATTATATCAGGTCTGACTGGAGCAGGAGGCAACTTCGGGTCTGGATTGACCCAGTTGGTTTTCTTCTCAAGCTCGAAATTCTCCACTTCTGCAGGTCTCTCCTTAATGGGAGTCATGATAGTGTGTTGCACTCTTCCTGTGACTCTGGTTCATTTCCCACAGTGGGGTAGCATGTTCCTTCCTCCTTCTAAAGACGTTAACAAATCCACTGAAGAACACTATTACACTTCTGAATGGGACGAGGAGGAGAGGCAGCAGGGCTTGCACTCGAAGAGTCTCAAGTTTGCAGAGAATAGCCGCTCTGAGAGAGGCAAGCGTGTGGGCTCTGCCGCAACACCTCCAAGCACAACTCCTTCCCATGTTTAG 1593 0.4834 MADSEGLPGSSMHGVTGREQTFVASVASPMVPTDTTAKFALPVDSEHKAKVFKLFSFAKPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKFDIGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDASGYLVVRFLIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIKKAGATPFTAWRIAFFFPGWLHVIMGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFVLLYGYSMGVELTTDNVIAEYFFDRFDLKLHTAGIIAATFGMANLVARPFGGYASDVAARLFGMRGRLWVLWILQTLGGVFCIWLGRANSLPIAVLSMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSSSKFSTSAGLSLMGVMIVCCTLPVTLVHFPQWGSMFLPPSKDVNKSTEEHYYTSEWDEEERQQGLHSKSLKFAENSRSERGKRVGSAATPPSTTPSHV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0395 530 FunFam Nitrate transporter 2.1 265 466 - -
Glsi04g0395 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Glsi04g0395 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Glsi04g0395 530 Gene3D MFS general substrate transporter like domains 56 253 IPR036259 -
Glsi04g0395 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 515 IPR044772 GO:0015112
Glsi04g0395 530 MobiDBLite consensus disorder prediction 486 513 - -
Glsi04g0395 530 FunFam High affinity nitrate transporter 57 254 - -
Glsi04g0395 530 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Glsi04g0395 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Glsi04g0395 530 MobiDBLite consensus disorder prediction 486 530 - -
Glsi04g0395 530 SUPERFAMILY MFS general substrate transporter 55 460 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0395 Glsi-ChrGlsi04 2583628 2585381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0395 1 530 Inorganic Solute Cotransporters AT1G08090 79.811 0.0 895