Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0391 ATGGATGAGAAAGTCCGAAAGAAAAGATCAAAGATTGACAGAAGCAAGGACAATATGGATATGCAAATGAATGATGAAAAGGATATGGGACGTAGTAGTATAAAGGTGGAGCCAAATAGAAAAAAGGAAAAGAAGCAAAAGGATAAAAAGAACAAACATGGAACCGATAAATTGTTCAATTGGAATGAAGTTGCTGAGGAAAATTGTACAGGTATAGAAGCCAAGAGAAAAACGTGCTCCAATGAAGGGGGTGTTACATATATGAGGAATGGGAAAGAAGAGAACAACAAAAGTAAGAGGAAGAAGAGAAAGAGGGTAAGAGATAACAATGAAATAGTAAATAGTAACACTGCTGATGATAAAGAAATGCAGTTGTTGGATGACAAGCAAGAAAGAAAAATGAGGAAAAGAAATAATTGTGATGATTCAATTTCTGGAATTCAAGAAACTGCTGCTTTGAAATCCAGCAACAAAAGCAAAGGAACAGAGGATATGGAGTTCAAAAGCAAAGAAGGTGGATCGTCTTTGGCGAGAGTCAAGACTAGAGATGCTTATACACATTCTGTTACCACTGAAGTTGATGATCAAGGAAAGAAGATGAAGAAGAAGAAACTGAGCAATAAAAGCAAAAGAACAGAAGGTAGTGAGTTCAAAAGCAATGGAGGTGATCCAGCTATAGCTGAAAGCAATGAAGGTGATCCACCTTTGGTTAATATCAATATGGGGGATGCTAGTGCACATTCTCTTGCCACTGAAGTTGATGATCAAGGCAAGAAGATGAAGAAGAAGAAGAAAAAGAAACTGAACAACAACTGCAAGAGAACAGAAGGTAATGAATTTAAAAGTAATGACATTCAAGGAAAGAACCAGAAGAAGAAGAAAAAGAAGAAGAAGAGCAATGAAGATAAACATGCCACAAAAAGAAAATTTTGTAATGCTGTAGCAGATGCTGATAATTCTTCTGATCTTGCACATGAAGGAACTCCTAAACGAGTAACTTTCTCTGATCGAGTGGAGGTTTTCAATGATGGCTTAGTGCGAGGGAAAAGGTTTACACCAGAGGAAGATGAGAAAATTAAAAAGGCTGTTCACAACTATATAGATACTCGTGGGCTGGGTGATGAAGGCCTAGATATGATTCTTCATTGCAAATCTCATCACGAGGTTAGAAATTGCTGGAAGGAAATTGCAGAGGCTTTACCTCATAGGCCTTGTGTAAGTGTATATTATCGTGCTCACATTTTATTTGAAAGGGATGAGAAACGTAAGTGGACCCCTGAAGAGTATGAATTTCTACGAAAGTTCCAGGAAAAACATGGATCTGATTGGAAATCGTTGGCTGATGCAATGGGGAAACATCGGTTTCATGTAAAGGATGCCTGGCGAAGGATAAAATTAACCAATACGAACAAAGGAAGGTGGCAACAAGAGGAGTATCAAAATTTATTTGATTTAGTAAACAATGATCTACGCCTCAGGGCTTTGGAGGATTATAGAAAATTAAAGCATGGTATGTTGCGGGATAATGTTTGTTGGGAGGCAATTGGTGACAAGTTGGCAACTAGAACCAGTCAACATTGCTGCAAAAAGTGGTATGATCAATTAACATCACCTATGGTTGTTGAAGGTATATGGGCTGATACTGATGACTACCGCCTGCTTAATGCTTTATTTGCTTTGGATGCCTGCTGCATGGAGGAGGTGGACTGGGACAATGTGCTTGAGCATAGGTCTGGTGATGTATGTAGAAAACGGTGGAAACAAATGGTCCAGCATATTGGAGAGCATGGTACCATGTCATTTGCTGAGAAGGTGGAAGTTCTTTCCAAGAGATATTGTCCTGACTTAGTGGAAGCAAGAGAAGCCTTTGATAGCAAGCCTGTGATTCCTTGA 1893 0.3883 MDEKVRKKRSKIDRSKDNMDMQMNDEKDMGRSSIKVEPNRKKEKKQKDKKNKHGTDKLFNWNEVAEENCTGIEAKRKTCSNEGGVTYMRNGKEENNKSKRKKRKRVRDNNEIVNSNTADDKEMQLLDDKQERKMRKRNNCDDSISGIQETAALKSSNKSKGTEDMEFKSKEGGSSLARVKTRDAYTHSVTTEVDDQGKKMKKKKLSNKSKRTEGSEFKSNGGDPAIAESNEGDPPLVNINMGDASAHSLATEVDDQGKKMKKKKKKKLNNNCKRTEGNEFKSNDIQGKNQKKKKKKKKSNEDKHATKRKFCNAVADADNSSDLAHEGTPKRVTFSDRVEVFNDGLVRGKRFTPEEDEKIKKAVHNYIDTRGLGDEGLDMILHCKSHHEVRNCWKEIAEALPHRPCVSVYYRAHILFERDEKRKWTPEEYEFLRKFQEKHGSDWKSLADAMGKHRFHVKDAWRRIKLTNTNKGRWQQEEYQNLFDLVNNDLRLRALEDYRKLKHGMLRDNVCWEAIGDKLATRTSQHCCKKWYDQLTSPMVVEGIWADTDDYRLLNALFALDACCMEEVDWDNVLEHRSGDVCRKRWKQMVQHIGEHGTMSFAEKVEVLSKRYCPDLVEAREAFDSKPVIP 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0391 630 Coils Coil 258 278 - -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 79 308 - -
Glsi04g0391 630 Pfam Myb-like DNA-binding domain 424 482 - -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 288 303 - -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 1 59 - -
Glsi04g0391 630 Gene3D - 425 463 - -
Glsi04g0391 630 CDD SANT 350 413 IPR001005 -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 185 201 - -
Glsi04g0391 630 CDD SANT 423 452 IPR001005 -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 143 158 - -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 121 142 - -
Glsi04g0391 630 Pfam Myb-like DNA-binding domain 349 410 IPR001005 -
Glsi04g0391 630 SUPERFAMILY Homeodomain-like 421 482 IPR009057 -
Glsi04g0391 630 ProSiteProfiles Myb-like domain profile. 466 535 IPR001005 -
Glsi04g0391 630 ProSiteProfiles Myb-like domain profile. 416 465 IPR001005 -
Glsi04g0391 630 SUPERFAMILY Homeodomain-like 515 595 IPR009057 -
Glsi04g0391 630 Gene3D - 344 411 - -
Glsi04g0391 630 Gene3D - 464 539 - -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 159 177 - -
Glsi04g0391 630 ProSiteProfiles Myb-like domain profile. 537 590 IPR001005 -
Glsi04g0391 630 PANTHER GB|AAC33480.1 7 630 - -
Glsi04g0391 630 MobiDBLite consensus disorder prediction 271 287 - -
Glsi04g0391 630 SMART sant 470 537 IPR001005 -
Glsi04g0391 630 SMART sant 347 418 IPR001005 -
Glsi04g0391 630 SMART sant 420 467 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0391 393 592 MYB-Related Transcription Factor Family AT3G18100 27.143 8.15e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi04g0391 Myb_DNA-binding 1.2e-05 CL0123