Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0387 ATGAGTCACGGAGGGGAACCCAACAAAATCAGGAATGCCGCTTTAGTTTTCATTGCTGCGTTAAGCTGCTTGTCGGGGCAAGTTTCTTCTGATGACGGGAAGAACAATTCAGCTGCGGTTCAGCTCTTGTCCCAGGCTATCTACGGCAGCATGTCTAGTTTCACCAGCATCTTCAAGGACGAAATCAAACAAAAAATGAGTTACTGCATTATTGATGTGGATGCTGATTGGGATGGGGCATTTAATTTCTCCAAGGATCTGAGTTTTTTGACCTCATGTTCCCAAACTTTAAAAGGAGATATTACAGAGCGCCTATGTACAGCAGCAGAAATACAATTCTATGCCAGTAGTTTTGCTGTAGCATCTAAGGCAAGGACCAATTCCTTGAAGCCCAACAAGAACTGTAATTTGACCACATGGCTTAATGGATGTGAGCCTGGATGGGCCTGTAGTGCTGGTCAGAAGGTACAACTTAATTCCAAGGAAATACCAGTTAGATCTACCAACTGCCAGCCTTGTTGTGCGGGTTTCTTTTGCCCTCATGGAATCACTTGCATGATACCTTGCCCATTGGGTTCTTACTGTCCGCGTGCACAGCTCAATCAATCTACTGGAATATGTCAACCATATCGTTATCAGCTACCTCCTGGAAAGACAGACCATAGTTGTGGGGGAGCAGATATTTGGGCGGACGTTGGGAGTAGTTGGGAGGTATTCTGTTCAGGGGGATCATACTGTCCTTCTACTATCCAAAAAAATCCTTGCAGTGGGGGATTGGCGAGTTGTGATCCTGAATCAGTGAATCAGAATATTACAGCATATGGTGTCATGGCTGGCTTGAGCTTCTTGCTTATTATCATATATAACTGCTCTGACCAAGTTCTTGCAACTCGAGAAAAAAGACAAGCAAAATCAAGAGAAAGGGCTGCTCAAAGTGTAAGAGAAACACAAGCACGTGAAAAGTGGAAATCTGCAAAAGATATTGCTAAGAAGCATGCAGTAGACCTGCAAACACAATTATCGCGAACATTTTCTCGTAGAAAATCTACGAGGCAAGATCTGAAAGGTTTTGGTTCTAAATCTGCTACAGATACTGCCGCATTACCATTGCCCCCAGGAAGTGCTGGTACTTCAAAAGGAACGAAAAAGGAGAAGAGCAACCTCACAAAAATGATTAAAGAAATTGAGGAAGACCCTGATAGTCAAGAAGGTTTCAATGTTGAGATAGGAGATAAAAATATAAAAAAGCAAGCACCAAAGGGTAAGCAATTGCATACTCAGAGCCAAATTTTTAAGTATGCATATGGTCAGATTGAAAAAGAAAAGGCTTTACAGGAACAAAATAAGAACCTTACCTTCTCCGGAGTTATTTCAATGGCTAATGATATTGAGATCAGGAAGAGGCCTACAATTGAGGTTGCTTTTAAAGATTTAACCCTCACATTGAACGCCAAAAACAAGCATCTTCTGAGATGTGTGACTGGGGTACTACATCCTGGTCGAGTTTCAGCTGTCATGGGCCCATCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACAGGAAAAGCAACTGGATGTTCTACTACTGGTTCAGTTCTTATAAATGGCAAGGTTGAATCTATCCGGTCATACAAGAAGATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAGGAGAATCTGTGGTTCAGTGCTAGATGCAGACTCGCGGCTGATCTACCAAAACCAGAGAAGGTCCTAGTAGTTGAAAGAGTGATTGAGGCCTTAGGTCTGCAGGCAATTCGAGATTCTCTGGTTGGGACGGTGGAAAAGCGAGGAATCTCTGGAGGTCAAAGGAAACGAGTGAACGTAGGACTGGAAATGGTTATGGAACCGTCACTTCTGATTTTAGATGAACCGACATCTGGTTTAGACAGTTCATCTTCTCAGTTACTGCTTAGAGCACTTAGACGTGAGGCTCTTGAAGGAGTAAATATATGTGTGGTCCTCCACCAACCAAGTTACACATTGTTCAGGATGTTTGATGATTTTATACTGCTAGCTAAAGGCGGTCTTATAGTGTATCATGGACCAGTGAAGAAAGTTGAAGAGTATTTTTCCACCTTGGGGATTGTTGTACCTGAGCGTGTTAATCCTCCAGATTACTACATTGACATCTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTACCCAGTTCCTCTAGACATGCTACAGAGTGCCGAAGGAATGACCGTCCCAAGTGGTGAAAGTTCAACACCAGCAGCACCTACCCAAGAAGCAGGAACTGAGGGGCAGTCCTTTGCTGGAGAACTTTGGCTGGATTTAAAGTGCAATGTTGAGAAGCAGACAGATTTCCTACGACATACTTTCTTATCTTCAAATGATTTATCCAATCGGAATACCCCAGGAGTGTTCCAACAATACAGATACTTTCTTGGAAGGACTGGTAAGCAGCGGCTACGGGAAGCTAGAACACAGGCTGTAGATTTTCTAATTTTGTTACTAGCTGGAATCTGCTTAGGAACACTTGCCAAAGTGAGTGACGAATCGTTTGGAGTACAAGGTTACACATACACTGTAATAGCAGTCTCACTCCTGTGTAAGATTGCTGCCTTGAGATCGTTTTCACTAGATAAGTTACACTACTGGAGGGAGAGTGCTTCCGGCATGAGTAGCCTGGCTTACTTTCTTGCAAAGGATACGGTTGACCATTTCAATACAATTATAAAGCCTCTGGTCTATCTCTCAATGTACTATTTCTTCAACAATCCTAGATCATCTGTCATAGATAACTACTTTGTTCTGCTCTGTTTGATGTACTGTGTCACTGGCATAGCTTATATACTGGCAATCGCTTTTGAACCTGCTCCAGCCCAATTGTGGTCAGTGTTACTTCCAGTAGTTTTGACTCTCGTTGCAACCACTGAAGCTGATGCAGACAGCAAATATATGAACACTGTATCTGGCTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAAAAGATATGGTGGAGTTTGGTTAATATCTCGATGTGGTGCACTCTATGCCAGTGGCTACGATCTCAACCATTGGTATCGATGCCTAATCCTTCTCATCGTAACCGGAATAGCTAGTCGCATGGTTGCTTTCTTTTGTATGATAACCTTCCAGAAGAAATAA 3249 0.4272 MSHGGEPNKIRNAALVFIAALSCLSGQVSSDDGKNNSAAVQLLSQAIYGSMSSFTSIFKDEIKQKMSYCIIDVDADWDGAFNFSKDLSFLTSCSQTLKGDITERLCTAAEIQFYASSFAVASKARTNSLKPNKNCNLTTWLNGCEPGWACSAGQKVQLNSKEIPVRSTNCQPCCAGFFCPHGITCMIPCPLGSYCPRAQLNQSTGICQPYRYQLPPGKTDHSCGGADIWADVGSSWEVFCSGGSYCPSTIQKNPCSGGLASCDPESVNQNITAYGVMAGLSFLLIIIYNCSDQVLATREKRQAKSRERAAQSVRETQAREKWKSAKDIAKKHAVDLQTQLSRTFSRRKSTRQDLKGFGSKSATDTAALPLPPGSAGTSKGTKKEKSNLTKMIKEIEEDPDSQEGFNVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMANDIEIRKRPTIEVAFKDLTLTLNAKNKHLLRCVTGVLHPGRVSAVMGPSGAGKTTFLSALTGKATGCSTTGSVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLAADLPKPEKVLVVERVIEALGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICVVLHQPSYTLFRMFDDFILLAKGGLIVYHGPVKKVEEYFSTLGIVVPERVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYPVPLDMLQSAEGMTVPSGESSTPAAPTQEAGTEGQSFAGELWLDLKCNVEKQTDFLRHTFLSSNDLSNRNTPGVFQQYRYFLGRTGKQRLREARTQAVDFLILLLAGICLGTLAKVSDESFGVQGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTIIKPLVYLSMYYFFNNPRSSVIDNYFVLLCLMYCVTGIAYILAIAFEPAPAQLWSVLLPVVLTLVATTEADADSKYMNTVSGLCYTKWALEAFVISNAKRYGGVWLISRCGALYASGYDLNHWYRCLILLIVTGIASRMVAFFCMITFQKK 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0387 1082 MobiDBLite consensus disorder prediction 339 385 - -
Glsi04g0387 1082 MobiDBLite consensus disorder prediction 304 326 - -
Glsi04g0387 1082 Pfam ABC-2 type transporter 671 1082 IPR043926 GO:0140359
Glsi04g0387 1082 Pfam ABC transporter 493 642 IPR003439 GO:0005524
Glsi04g0387 1082 Gene3D - 472 709 IPR027417 -
Glsi04g0387 1082 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 473 715 IPR003439 GO:0005524
Glsi04g0387 1082 ProSitePatterns ABC transporters family signature. 614 628 IPR017871 GO:0005524|GO:0016887
Glsi04g0387 1082 Coils Coil 378 398 - -
Glsi04g0387 1082 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 426 1069 - -
Glsi04g0387 1082 FunFam ABC transporter G family member 24 467 709 - -
Glsi04g0387 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 713 IPR027417 -
Glsi04g0387 1082 CDD ABCG_EPDR 471 697 - -
Glsi04g0387 1082 SMART AAA_5 499 700 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0387 Glsi-ChrGlsi04 2520083 2525905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0387 500 708 Calmodulin-binding Proteins AT2G36910 28.139 5.53e-11 65.1