Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0385 ATGTGTAAAACCAAAATGGCCGTCAACGCCACCAATCCTACCTCAAGCCCTCGAAACTCTCGCACCCCACGCTCTACCCCTAAATCAAGAGCATCAAGACCCACCTTAGCCAACCCCCCTTCCTCCTCCGACCCCTCAACTTCATCCACCAGCTCCGCTCCTAACACCGGCTCCACTGGGTACATCCTCTCCTCCAATAACTCCATTTCAAGCCGAACCTCTCTCGCTAGTCTTCGAGATAGTCTACCTGAAAACCCCCACATCTACGATTTCTCTGAAATTTGCTCCGCCACTAACAATTTCCTCGCCAAGCGCTATTCTTCCTCCTCCTCCACCCCCTCTTGGCGCTGCACTCTTAGCGGCAGAGATGTCATTGTTTTCCAGCGCAAATTCCGACGCAAAATCCAGACTACTCAGCTCAGAGAACGCCTCTCTATGATTTGCCGTAGTCACCACGTCAGCATCATTAAGCTCATCGGCGCTTCCATCTCCGGCGACCATATCTACCTTGTGTACGAATTTGTGAATGGGGCTAATCTCTCGGATTGTTTGCGAAATACGAAAAACCTTCACTTTACGGTTCTGTCCAATTGGATATCTAGAATGCAGGTTGCTGCAGATCTTGCTCATGGGCTCGATTATATTCACAACAAAACGGGTTTTACCATAAACTTTGTGCATAACCACATCAAGAGCAGTGCTATCATTGTGACTGAACCTTCGTTCAACGCCAAGATTTGTCATTTCGGCGCGGCCCAGATGTGCGGCGAAATCGACGAAGAAAACGAAAGCGCCAAACAGGTGGGGGAGATCATTGAGGAGTCATCTTCATCCTTTCCTTCTATGAGAGGGTACACGTCGGGCAGCTCGAACATGCAATTCGAGGGGGTGAGAGGGTATATGTCGCCGGAATATCAATCCACCGGGGTGGCGACCCAGAAGTCCGATGTGTATGCTTTCGGGGTAGTGATGTTGGAGCTGTTATCAGGAGAGGAGCCATTGAAATTCAAATTCGATAATAAGAGCGGCGAATTCATGAGAAGCTCAGTGATCGATACGGCGAGGGCGGCCATCGAAGGTGGTTCTGACGGCGGTAGTAGCGTAGAAGGGAGGCTGCGGAAGTGGCTGGATAGGAGGCTGAAGGACTCGTTCCCGATTGACGTGGCAGAGGAGGTGACGCGTGTAGCGTTAGAGTGCGTACACGTGGATCCAGACAAAAGGCCTAACATGGGACGTGTTGCCGGAAAAATCTCGAGGCTGTATCTGAAGTCAAGGAATTGGTCCGACAACTTGAGGATGCCAACTGATATTTCTGTCTCATTGGCTCCTCGATGA 1335 0.5064 MCKTKMAVNATNPTSSPRNSRTPRSTPKSRASRPTLANPPSSSDPSTSSTSSAPNTGSTGYILSSNNSISSRTSLASLRDSLPENPHIYDFSEICSATNNFLAKRYSSSSSTPSWRCTLSGRDVIVFQRKFRRKIQTTQLRERLSMICRSHHVSIIKLIGASISGDHIYLVYEFVNGANLSDCLRNTKNLHFTVLSNWISRMQVAADLAHGLDYIHNKTGFTINFVHNHIKSSAIIVTEPSFNAKICHFGAAQMCGEIDEENESAKQVGEIIEESSSSFPSMRGYTSGSSNMQFEGVRGYMSPEYQSTGVATQKSDVYAFGVVMLELLSGEEPLKFKFDNKSGEFMRSSVIDTARAAIEGGSDGGSSVEGRLRKWLDRRLKDSFPIDVAEEVTRVALECVHVDPDKRPNMGRVAGKISRLYLKSRNWSDNLRMPTDISVSLAPR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0385 444 ProSiteProfiles Protein kinase domain profile. 48 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0385 444 Pfam Protein kinase domain 132 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0385 444 MobiDBLite consensus disorder prediction 1 64 - -
Glsi04g0385 444 Gene3D Transferase(Phosphotransferase) domain 1 176 435 - -
Glsi04g0385 444 PANTHER OS09G0572100 PROTEIN 1 444 - -
Glsi04g0385 444 Gene3D Phosphorylase Kinase; domain 1 63 174 - -
Glsi04g0385 444 SUPERFAMILY Protein kinase-like (PK-like) 121 413 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0385 Glsi-ChrGlsi04 2510568 2511902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0385 84 431 Receptor kinase-like Gene Family AT1G51940 31.143 4.91e-41 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi04g0385 Pkinase 3.4e-25 CL0016