Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0383 ATGCTTAACGACATTGTGGTTCTCGCCGTGGTATCCCTCCTCCTCTGCTGCTACGTCTTGCCAAATTACTCTGCAAAATTGGAAGATGGAAAAGCTTACAATGCAGTTCTGGATGATGGAAGTGTCGTTGCAGTGAAGAGGCTCAAGGATGCTCAGATTGGAGGGAAGAAAGAGTTCGAGCAGCACATGGAAGTTTTGGGAAAGCTGAGGCATCCGAACATTGTTAATGTGAGGGCTTACTATTTTGCAAGAGACGAGAAGTTACTGGTCTCTGATTTCATATCCAATGGGAACCTGTTCTGGCTCCTTCACGATGATGAATGGGAAACAGTGGGACCAAAGAACAAATCTGCTGTAACAAGAATTCAAAGTTTTGTTCCTTCCCAATTGAGCGATGTTTTTGGAGGAGAATTGAGAAGTTTGGTGAGGGCTAAAGCCAAAGAAATTTCAGAATTGGAGGCCGCAGCCTACCCTGTACCCCACGCCACTGCTTCACGCACGCACGCACGCTATATAAGTAAACGCATATCAGCTGACTCTCTCAAGCCTCAAATTCACAACCCGCTTTTTCACTTGTCTTCACAAATGGCTCGCATAGCAACTCTTGTTTTCTTAGCTTTCTGTTTCCTTTTCAATGTCATCAACCTTCCTTTCCTCACAAATGCCGTCTCCACATGCGGTGGAGGCTGTAGGACCCTCGATGACTGTGCTGGTCAGCTCATTTGCATCAACGGAAAATGCAACGATGACCCCGATGTCGGTACCCACATTTGCGGCGGCGGCGGCGGCGGCGACAATTGCCAGCCCTCCGGCACTCTGAATTGCGACGGCCAATCTCACCCTCAATACAGGTGCTCTCCGCCAGTTTCGTCCTCCACTTCAGCCATTCTCACCCTCAACGATTTCAGCGAAGGTGGCGACGGAGGGGCCGCCTCCGAATGCGACGAGAAGTTCCACGACAACTCTGAGCGAGTGGTGGCGCTGTCCACCGGATGGTACAATGGTGGCTCAAGATGCGGGAAAATGATAAGAATCACGGCTAGCAACGGGAACAGTGTGACGGCCAAGGTGGTGGACGAGTGTGACTCGGTGAATGGGTGCGACAGCGAGCACGCCGGTCAGCCACCGTGCCGTAATAACATTGTGGATGGGTCGCAAGCAGTGTGGGATGCGTTGGGGCTGAATACGGATGTGGGCGAAGAGCGTGTTACTTGGTCCATGGCCTGA 1227 0.5126 MLNDIVVLAVVSLLLCCYVLPNYSAKLEDGKAYNAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEVLGKLRHPNIVNVRAYYFARDEKLLVSDFISNGNLFWLLHDDEWETVGPKNKSAVTRIQSFVPSQLSDVFGGELRSLVRAKAKEISELEAAAYPVPHATASRTHARYISKRISADSLKPQIHNPLFHLSSQMARIATLVFLAFCFLFNVINLPFLTNAVSTCGGGCRTLDDCAGQLICINGKCNDDPDVGTHICGGGGGGDNCQPSGTLNCDGQSHPQYRCSPPVSSSTSAILTLNDFSEGGDGGAASECDEKFHDNSERVVALSTGWYNGGSRCGKMIRITASNGNSVTAKVVDECDSVNGCDSEHAGQPPCRNNIVDGSQAVWDALGLNTDVGEERVTWSMA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0383 408 Gene3D - 297 408 IPR036908 -
Glsi04g0383 408 CDD DPBB_kiwellin-like 280 407 - -
Glsi04g0383 408 Gene3D Phosphorylase Kinase; domain 1 22 93 - -
Glsi04g0383 408 Pfam Protein tyrosine and serine/threonine kinase 38 110 IPR001245 GO:0004672|GO:0006468
Glsi04g0383 408 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 214 406 IPR039271 -
Glsi04g0383 408 SUPERFAMILY Protein kinase-like (PK-like) 30 106 IPR011009 -
Glsi04g0383 408 SUPERFAMILY Barwin-like endoglucanases 288 407 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0383 Glsi-ChrGlsi04 2494307 2500250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0383 30 104 Receptor kinase-like Gene Family AT1G68400 71.053 4.21e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi04g0383 PK_Tyr_Ser-Thr 1.5e-07 CL0016