Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0380 ATGAGCAGCACAAGACCCGAATTGCATGAAGCGCAACAAATTCGGCGTGGGAAGTCGAGAATCCAGAATTGTTCCCAGCATTTAGAAGATTTCCCTAACAATCTTGAACAATTGTCTTTACGCCCAGGGTTTAATTTAGATCTTCTTCAAGTTAGGAGTGTTAGAAATGCCAATTTGCTTCACGAACCAGCTTGTTGTTCATCTGAAATGGTCAATTTTTCAACGGCTTCGAATTCTATGTCTTTTAATAGGAACACAATGGAGTCTCAAGGACTAGGTGCAGGTGAACCCAGTAGGCTGATGATGCCTCAGTTCGCTTCTTTTCCCCATTCATCGGACCCAGCATTGTCCAGTATTCGTTCTTCACCCGAAGAACAATGCGAAGCGCGTCACTTTGGCAATTGGAGAAATAGTGGCTCAGACCAAGGATGTGGTTGGATGTCTAATTATGCATGTAGTTCTGTGGCAAATGTAAGAAATCCTAATTCCAATTTTGTTGCGGAAGTCAATAATGTGTCTGCTTGTCAGCTCCCTGGGATGTCTCGTTATAATGAATTCACAGATGTACAGTCTTCTCTGAACCATCCGTCTGGCGAAATGGCGACTCGAGGAAGCCAACGACAATTTGGTGAAATGCAACATCCTTCTCCACTCTATCTGAACACTTTGCAGGATATTGTCAAGTCAGCTTCTATCAGTGACCAAGGGTCAGAAATGGTTTCAGTGATGCAGCAAACTGGCCATGGCATTTGGGTGGAAAATGGCAATGAACTTCCACACTATAGAAATCAATCAAATCAGTTGCGTTTTGGAAATGCTAGTTCTTGGACAAATCGAACAGTTGACAATTCCCTCCGTTGTAATATTCCACTGGGTTTCACAGACAAAAGGGGTGATGAAGACTCGAGTCCTCTCTCGAGTGATTCAAATAACCAGGGCTTATCTTTATCACTTTCCTCGAATGCTCACTCTGCACTTTCTTCTCAGTTTGGAGAGAGGTGTTCTAAGGATCCTCAATCTATTTTGAATCCCTCTTTCATTTCTAAAGATTGTGACGAATCACTTCAAAACATGGTGGTGGGACTGGGAATACCTTCACACACTGTTTATCGAAATGTGGGTCCTCTTGGCCCTTTCACTGGGTATGCTTCCGTATTAAAGAGTTCGAATTTCTTAAAACCAGCCCAACAGTTGTTAGATGAGTTCTGTTGCCTGGCTTGTCCAAAACTTAAGAAAGGATGTGATGCTGCTGGGAGGGTTTCTGGAGAAGCAAGTGCTTCTATTTCGGCTGACGCTAATGCAAAAGAAAGAGGGGTTGGTTCAAAGGGTATAAATTCTGGTGCTTCGTCCTCCATGTTTTATAGTTCAAATGAAAATGGAAATAGTGTTGATGGTGGAGCCGGGAGTAGCTTTTCTTTTTCTTATCGGCCAGAGTATCAGCACAAAATGGCAAAGTTTCTGTGCATGCAAGACGAGGTTGGTTATCACTGCCCCGTATAA 1500 0.4307 MSSTRPELHEAQQIRRGKSRIQNCSQHLEDFPNNLEQLSLRPGFNLDLLQVRSVRNANLLHEPACCSSEMVNFSTASNSMSFNRNTMESQGLGAGEPSRLMMPQFASFPHSSDPALSSIRSSPEEQCEARHFGNWRNSGSDQGCGWMSNYACSSVANVRNPNSNFVAEVNNVSACQLPGMSRYNEFTDVQSSLNHPSGEMATRGSQRQFGEMQHPSPLYLNTLQDIVKSASISDQGSEMVSVMQQTGHGIWVENGNELPHYRNQSNQLRFGNASSWTNRTVDNSLRCNIPLGFTDKRGDEDSSPLSSDSNNQGLSLSLSSNAHSALSSQFGERCSKDPQSILNPSFISKDCDESLQNMVVGLGIPSHTVYRNVGPLGPFTGYASVLKSSNFLKPAQQLLDEFCCLACPKLKKGCDAAGRVSGEASASISADANAKERGVGSKGINSGASSSMFYSSNENGNSVDGGAGSSFSFSYRPEYQHKMAKFLCMQDEVGYHCPV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0380 499 Pfam Associated with HOX 385 493 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0380 Glsi-ChrGlsi04 2479820 2481319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0380 371 403 Homeobox Transcription Factor Family AT5G02030 81.818 8.55e-11 62.4