Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0374 ATGTTACACCGAGAGAACGGCAACGACGACGTTCGGATGGGGGAAAAGATTCACAATAGCAAGGACCCGTTGAAGTGGGAGGAAGCGGCGGAGTCGATGAAGGGCAGCTATTTGGAGGAAGTGAAGAAGATGGTGAGGGATTACAGGAAGACGGTGGTGAGGCTGGGAGGGGAGACATTGACGGTGGGGCAGGTGGCCGCGGTGGCGAGGGGGAGAGTGGAGGTGGAGCTGAACGAGGGAAGGAGGGAGGGAGTGAAGGCGAGCAGCGAGTGGGTGATGGAGAGCACGAAGAAGGGGACAGATAGTTATGGGATCACAACGGGATTCGGTGCAACGTCGCACAGGAGAACCAGGCAGGGGGTGGCTCTGCAAACTGAGCTCATCAGGTTTTTGAATGCCGGAATATTTGGGAATGGGACAGAAGCTTGCCATACCTTGCCACACAGTGCAACAAGAGCTGCAATGCTGGTCAGAATCAACACCCTCCTTCAAGGCTACTCTGGCATCAGATATGAGATACTAGAAGCCATTGCAAAGCTACTCAATCACAGCATTACTCCATGCTTGCCCTTGCGTGGTTCAATTTCGGCCTCTGGGGACTTGGTTCCCTTTTCATACATAGCTGGACTATTGACTGGAAGGCCTAATTCTAAGGCTGTTGGACCCAATGGCGAGTCCCTAAGTGCTACAGAAGCTTTTCATCTTGCTGGAATCAATGAAGGTTTCTTTGAGTTGCAGCCCAAGGAGGGCCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCTTCTATTGTTCTTTTTGAGGCTAACATCTTAACCATTCTCTCTCAAGTTATGTCTGCAATATTCGCCGAAGTTATGCATGGGAAGCCTGAGTTTACAGACCATTTGACTCACAAATTGAAACATCATCCTGGGCAGATTGAAGCAGCAGCAATAATGGAGCACATCTTGGATGGAAGTGCTTTTGTTAAAGCTGCAAAAAAGTTGCATGAGATAGATCCCTTTCAAAAGCCAAAGCAAGATAGATATGCTCTTCGAACTTCACCACAATGGCTAGGTCCTCAAATTGAAGTTATCAGGTCATCAACAAAATCCATTGAGAGGGAGATCAACTCTGTGAATGATAACCCTTTGATTGATGTATCAAGGAACAAAGCCTTACATGGTGGCAATTTTCAGGGTACCCCAGTTGGGGTTTCAATGGACAACACTAGGTTAGCTTTGGCTGCGATTGGAAAACTCCTTTTTGCTCAAATGTCAGAGCTGGTTAATGATTTCTACAATAATGGGTTGCCTTCAAATCTTTCTGGGGGTCGTTTTCCAAGCTTGGATTATGGATTCAAGGGTGGTGAGATAGCAATGGCTGCATATTGTTCTGAACTTCAGTTTTTAGCAAACCCAGTCACTAATCACGTCCAAAGTGCCGAACAACACAACCAAGATGTGAACTCATTAGGACTAATCTCTGCCAGGAAAACAGCTGAAGCAGTTGAGATATTGAAGCTCATGACTTCAACCTACTTGATTGCGCTTTGTCAAGCTATAGATTTGAGGCATTTGGAGGAGAACTTGAAGAACACGGTCAAGAATACGGTGAGCCAAGTGGCTAAAAAAGTCCTGACCGTGGGTGTCAATGGGGAGCTTCATCCTTCGAGATTTTGTGAGAAAGATTTGCTCGTAGTGGTTGATCGTGAACATGTTTTTGGCTACATTGATGACCCGTGTAATGCTACATACCCTTTGATGCAGAAACTAAGGCAAGTGCTTGTGGAACATGCATTGATGAGTAATGATGGTTTGAAAAGTGGATATGCTTCAATATTCCTGAAAATCGGTGCCTTTGAGGAGGAACTAAAGACAGTATTGCCCAACGAAGTTGAGTCTGCAAGGAATGCCTTTAAGAATGGGAGTTCGGAAATTCCTAACAAAATAAAAGAGTGCAGGTCCTATCCACTTTACAAGTTTGTAAGGAAGGAGTTGGGGACACAGTTTTTAACAGGAGAGAAAAGTAAGTCACCTGGAGAAGATTTTGATAAAGTTTTCACTGCAATTTGTCAGGGAAAGATGATTGATCCGCTGTTTGAATGCATCAAGGATTGGGATGGTGCTCCTCTTCCCATATGTTAA 2136 0.4565 MLHRENGNDDVRMGEKIHNSKDPLKWEEAAESMKGSYLEEVKKMVRDYRKTVVRLGGETLTVGQVAAVARGRVEVELNEGRREGVKASSEWVMESTKKGTDSYGITTGFGATSHRRTRQGVALQTELIRFLNAGIFGNGTEACHTLPHSATRAAMLVRINTLLQGYSGIRYEILEAIAKLLNHSITPCLPLRGSISASGDLVPFSYIAGLLTGRPNSKAVGPNGESLSATEAFHLAGINEGFFELQPKEGLALVNGTGVGAGLASIVLFEANILTILSQVMSAIFAEVMHGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAFVKAAKKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRFPSLDYGFKGGEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMTSTYLIALCQAIDLRHLEENLKNTVKNTVSQVAKKVLTVGVNGELHPSRFCEKDLLVVVDREHVFGYIDDPCNATYPLMQKLRQVLVEHALMSNDGLKSGYASIFLKIGAFEEELKTVLPNEVESARNAFKNGSSEIPNKIKECRSYPLYKFVRKELGTQFLTGEKSKSPGEDFDKVFTAICQGKMIDPLFECIKDWDGAPLPIC 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0374 711 Pfam Aromatic amino acid lyase 60 534 IPR001106 -
Glsi04g0374 711 FunFam Phenylalanine ammonia-lyase 524 645 - -
Glsi04g0374 711 FunFam Phenylalanine ammonia-lyase 258 554 - -
Glsi04g0374 711 PANTHER HISTIDINE AMMONIA-LYASE 18 711 IPR001106 -
Glsi04g0374 711 FunFam Phenylalanine ammonia-lyase 13 257 - -
Glsi04g0374 711 NCBIfam phenylalanine ammonia-lyase 22 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Glsi04g0374 711 Gene3D - 13 257 IPR024083 -
Glsi04g0374 711 SUPERFAMILY L-aspartase-like 22 711 IPR008948 GO:0003824
Glsi04g0374 711 Gene3D - 524 645 IPR023144 -
Glsi04g0374 711 CDD PAL-HAL 58 521 IPR001106 -
Glsi04g0374 711 Gene3D Fumarase/aspartase (Central domain) 259 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0374 Glsi-ChrGlsi04 2390922 2393573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0374 3 711 Monolignol Biosynthesis Gene Families AT2G37040 75.939 0.0 1171