Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0364 ATGAAGGATTCTTGGTTTTTCGACAAGAATTTTAACGGCCTATCAGATGAAATCTTTGATGATGTCATCAAATTTTTTGATTTCCCGCTAGAAGATGTGGAAACTAATGCTGTGGAGGAAGATTGGGATGCCCAATTCAAATGCCTTGAAGAGCCATCTTTTGATGTTTTCTCAGTATCTTCATCAGGAATTAAAACTCAAAAAGGAAATCCAAAACTTGGAAGGAGTATCTCTGCTTCTTGCCATGAGGTTTCCCCTATAGAACAACTTCCAGAGATTGATGGAGCTACATATGTCAAAAGCATTCCCGACCAGAATGTTTCTTCCAATGCCAAATATTTGCGCCATTTCCGGACCTACAGTCCAGTCTGTGTTTTCGAAAGCAGTAGTTCTTCTTCAGGTGAGAATTCCCTTGATCAGCCTGTCATCCCAAAGCGTGCTCGCAGCAAACGTCGACGCCTCTCAAGTTTCAGCCCTATGTTCTCAATTCCGTTCATCTCTACTTCACCAGCTTTGCAAAAATCTCGAAGGGCAGCTGCCTCTGAATCATATTTTGAAACACATCTTAATGGGAAATTATCAAATGGAGTCAAAAGGAAGCAGAGGAAAAAGGATCTATCCATGCTCTCAGGTCACATTGAGATGAAGATGTCCTCATCGCGGGAGTCAGTCATGCCCAGAAAATGCATGCATTGTGAGGTGACAAAGACCCCACAATGGAGGGAGGGGCCTATGGGCCCAAAGACCCTCTGCAATGCATGTGGGGTGCGATACAGGTCTGGCCGCCTCTTTCCCGAATACCGGCCTGCAGCCAGTCCCACTTTTATAGCATCATTGCACTCTAACTGTCACAAGAAGGTCACAGAGATGAGAAATAGAACCATCCAGGATGCTGATAAGGGTCCTATGTTTCCTTTGTCATCAACCCTTTCTCGAAATTCACTAGGATAA 951 0.4416 MKDSWFFDKNFNGLSDEIFDDVIKFFDFPLEDVETNAVEEDWDAQFKCLEEPSFDVFSVSSSGIKTQKGNPKLGRSISASCHEVSPIEQLPEIDGATYVKSIPDQNVSSNAKYLRHFRTYSPVCVFESSSSSSGENSLDQPVIPKRARSKRRRLSSFSPMFSIPFISTSPALQKSRRAAASESYFETHLNGKLSNGVKRKQRKKDLSMLSGHIEMKMSSSRESVMPRKCMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFIASLHSNCHKKVTEMRNRTIQDADKGPMFPLSSTLSRNSLG 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0364 316 Gene3D - 223 273 IPR013088 GO:0006355|GO:0008270
Glsi04g0364 316 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 225 284 - -
Glsi04g0364 316 ProSiteProfiles GATA-type zinc finger domain profile. 223 259 IPR000679 GO:0006355|GO:0043565
Glsi04g0364 316 MobiDBLite consensus disorder prediction 129 151 - -
Glsi04g0364 316 ProSitePatterns GATA-type zinc finger domain. 229 254 IPR000679 GO:0006355|GO:0043565
Glsi04g0364 316 PANTHER GATA TRANSCRIPTION FACTOR 34 295 - -
Glsi04g0364 316 CDD ZnF_GATA 228 275 IPR000679 GO:0006355|GO:0043565
Glsi04g0364 316 SMART GATA_3 223 273 IPR000679 GO:0006355|GO:0043565
Glsi04g0364 316 Pfam GATA zinc finger 229 262 IPR000679 GO:0006355|GO:0043565
Glsi04g0364 316 FunFam GATA transcription factor 218 302 - -
Glsi04g0364 316 MobiDBLite consensus disorder prediction 294 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0364 Glsi-ChrGlsi04 2301303 2304773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0364 8 299 C2C2-Gata Transcription Factor Family AT1G08010 36.013 4.99e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Glsi04g0364 GATA 3.5e-16 CL0167