Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0321 ATGGACGGAGATCAACTCACCTCTAATTACAGGTTTCCACCTGGTTTCAGGTTCCATCCATCTGATGAGGAACTCATAGTTCATTACTTGCACAACAAAATCAGTTCACGTCCACTTCCAGCACCCATCATTGCTGAAATAGATCTTTATAAGTTTAACCCATGGGAGCTACCCAAGAAAGCTTTGTTTGGGGAGGATGAATGGTATTACTTCAGCCCAAGAGATAGGAAGTACCCAAATGGATTAAGGCCAAACAGAGCAGCGGCTTCAGGATATTGGAAGGCAACTGGAACTGACAAGCCAATTCTCACCCGCTGCGGATCAAACCGCATAGGAGTGAAGAAAGCTCTAGTTTTTTACTCAGGTCGTCCTCCCAAAGGTACTAAGACCGATTGGATCATGAACGAGTACAGATTGGTTGACTCAACCACCAAAACTTCCAGGTTAAAAGGTTCCATGCGGTTGGATGACTGGGTACTATGTCGGGTTCGATACAAAGGCTACTCCTCAAAGAATGCATGTGAAAATCAGGAGAATCATTGTGGCCCAAATTTGCTGACAAATCTACCAAGGTACGAGGAATACCCAACAAACACTAGCATTCAGGCTGACGTGATCACAGATTATCAAATCTTAGCCTCTATTCTTGTTGATGAACCTATACCTCCCACTGAGAACATGTCTAGTCTGAACTTCAGAGGCAGCAAAGCCAACACTCTCACTTCCGTGTATGAAGATGGTTTCAGTAAAGTGAATCCTCAGATGACAATTCCTTCTCTGGACAGTTACTTCGACCCTCTGAAAAGAAAATCCAATCATGAGGATAATCAATGTGGGAATCTCATCTCTTTTGACGGGAAGCTAAACGCTGACACCAAAATTGAGGATCTTCCTAGCAAGGTGTTGACGAATACTGATACCAACTGCTACCAAAACCAGTCTCATGATGGCATTCTCAACGAGAGCACAGCAGATCCTAGCATTAATTTTCAAGAACTGAATGAATTAGGCTTCACAGGAAGATACTTGCAATGA 1035 0.4338 MDGDQLTSNYRFPPGFRFHPSDEELIVHYLHNKISSRPLPAPIIAEIDLYKFNPWELPKKALFGEDEWYYFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILTRCGSNRIGVKKALVFYSGRPPKGTKTDWIMNEYRLVDSTTKTSRLKGSMRLDDWVLCRVRYKGYSSKNACENQENHCGPNLLTNLPRYEEYPTNTSIQADVITDYQILASILVDEPIPPTENMSSLNFRGSKANTLTSVYEDGFSKVNPQMTIPSLDSYFDPLKRKSNHEDNQCGNLISFDGKLNADTKIEDLPSKVLTNTDTNCYQNQSHDGILNESTADPSINFQELNELGFTGRYLQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0321 344 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Glsi04g0321 344 SUPERFAMILY NAC domain 8 166 IPR036093 GO:0003677|GO:0006355
Glsi04g0321 344 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Glsi04g0321 344 PANTHER NAC TRANSCRIPTION FACTOR 56 12 213 - -
Glsi04g0321 344 FunFam NAC domain-containing protein 72-like 21 171 - -
Glsi04g0321 344 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0321 Glsi-ChrGlsi04 2066596 2068186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0321 11 175 NAC Transcription Factor Family AT1G61110 67.630 2.32e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi04g0321 NAM 3.3e-37 No_clan