Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0320 ATGAGCGTTATCGATATTCTCTTCCGAGTCGATACAATATGCCAGAAATACGACAAATACGATATTGATAAGCAGCGGCAGCTCAATGCCTATGGAGATGATAACTTTGCTCGCCTCTATGCTGCCGTTGAAAGTAGCATCCAATCCGCTCTTAAAAAATCGGAGGTGGCTTCGCAGGATAAGAACAGGGCTTCTGCTGCGGCATTGAATGCAGAAGTTCGTCGGACCAAGGGTCGACTCATGGACGAAGTCCCTAAACTACGTAAACTGGCGCAGAAGAAGGTTAAGGGTCTCACAAATGAGGAACTGGCCATTCGGAATGATCTGGTTCTGGCATTGCCAGACAGGATTCAAGCAATACCAGATGGTATTGCCTCTGCGGCTATTCAAGGCGGAGGATGGGCTGCTCCCACATCTCATCAGCATATTACGTTTGATTCATCTGAGGTAGACCATGACGATGGATATTTCCAACAAAGTGAAGAATCAAGTCAGTTTAGGCAAGAGTATGAAATGCGAAAAATGAAACAGGATGAAGGACTTGATATCATATCAGATGGATTGGATACGTTAAAAAATTTGGCCCTTGATATGAATGAGGAAATAGATCGGCAAGTTCCATTAATGGATGAAATTGATACAAAGGTGGATAAGGCAACCTCTGATATTAAAAATAATAACACAAGGCTGAAGAAAACTCTCAACGAGGTGAGGTCAAGTCGAAATTTCTGCATTGACATTATTCTGCTGTGTGTTCTTCTTGGCATTGCTTCCTATTTATACAACAAAGCACGGGATATCGTCATTAACTTTCAACATGGCATATCTGTTGCTGCAATTACTAAAAGCCAAGTAATGTCATCCATGTCTATGATTCTGTGGAAGGTATCAGCCTACTAG 900 0.4233 MSVIDILFRVDTICQKYDKYDIDKQRQLNAYGDDNFARLYAAVESSIQSALKKSEVASQDKNRASAAALNAEVRRTKGRLMDEVPKLRKLAQKKVKGLTNEELAIRNDLVLALPDRIQAIPDGIASAAIQGGGWAAPTSHQHITFDSSEVDHDDGYFQQSEESSQFRQEYEMRKMKQDEGLDIISDGLDTLKNLALDMNEEIDRQVPLMDEIDTKVDKATSDIKNNNTRLKKTLNEVRSSRNFCIDIILLCVLLGIASYLYNKARDIVINFQHGISVAAITKSQVMSSMSMILWKVSAY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0320 299 CDD SNARE_Qc 176 232 - -
Glsi04g0320 299 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Glsi04g0320 299 PANTHER SYNTAXIN 44 252 IPR045242 -
Glsi04g0320 299 Pfam SNARE domain 208 257 IPR000727 -
Glsi04g0320 299 SUPERFAMILY SNARE fusion complex 164 232 - -
Glsi04g0320 299 Gene3D - 171 232 - -
Glsi04g0320 299 SMART tSNARE_6 166 233 IPR000727 -
Glsi04g0320 299 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Glsi04g0320 299 FunFam Putative syntaxin-71-like 171 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0320 Glsi-ChrGlsi04 2063194 2065357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0320 1 262 SNARE and Associated Proteins AT3G09740 67.803 5.16e-133 376