Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0308 ATGGGTGAAGAAAAGGCTCACATTAACATTGTCGTCATTGGTCATGTCGACTCTGGCAAGTCGACCACCACTGGTCATCTTATCTACAAGCTTGGCGGTATTGATAAGCGTGTGATTGAAAGTTCGAGACCACCAAATACTACTGCACTGTTATTGATGCCCCTGGTCATCCTGATTTCATCAAAAAATATGATCACTGGGACCAGTCAGGCTGACTGTGCCGTCCTGATTATTGACTCTACCACTGGAGGTTTTGAGGCTGGTATCTGCAAGGATGATCAGACTCGTGAACATGCTCTCCTTGCTTTCACACTTGGTGTGAAGCAAATGATCTGCTGTTGTAACAAGTTATTAATCTTTATGGATGCTACTACCCCCAAGTATTCCAAGGCTAGGTACGATGAAACTGTCAAGGAAGTTTCATCCTATTTGAAGAAGGTCGGTTACAACCCTGAGAAAATTCCTTTTGTGCCAATCTCTGGATTTGAGAGTGATAACATGATTGAGAGATCGACCAACCTTGACCGGTACAAGGTCCCACCCTCCTTGAGGCCTTTGACCAGATCAATGAGCCCAAGGAGGCCCTCTGATAAGCCCCTCCGATTACACCTCCAGGACGTCTATAAGATTGGTGGTATTGGAACTGTTCCGGTTGGTCGAGTGGAGACTGGTATCCTCAAGCCTGGTATGGTTGTGACCTTTGGCCCCTCTGGTCCAACAACTGAAGTTAAGTCTGTGGAAATACACATGAGGCTCTACAGGAGGCCCTTCCTGGCGACAATGTTGGATTCAACGTTGCTGTCGAGGATCTGA 813 0.4674 MGEEKAHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIESSRPPNTTALLLMPLVILISSKNMITGTSQADCAVLIIDSTTGGFEAGICKDDQTREHALLAFTLGVKQMICCCNKLLIFMDATTPKYSKARYDETVKEVSSYLKKVGYNPEKIPFVPISGFESDNMIERSTNLDRYKVPPSLRPLTRSMSPRRPSDKPLRLHLQDVYKIGGIGTVPVGRVETGILKPGMVVTFGPSGPTTEVKSVEIHMRLYRRPFLATMLDSTLLSRI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0308 270 Gene3D - 1 49 IPR027417 -
Glsi04g0308 270 Gene3D Translation factors 195 257 - -
Glsi04g0308 270 Gene3D - 58 188 IPR027417 -
Glsi04g0308 270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 215 IPR027417 -
Glsi04g0308 270 PANTHER TRANSLATION FACTOR 4 41 - -
Glsi04g0308 270 Pfam Elongation factor Tu GTP binding domain 61 168 IPR000795 GO:0003924|GO:0005525
Glsi04g0308 270 Pfam Elongation factor Tu GTP binding domain 6 40 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0308 Glsi-ChrGlsi04 1993400 1994416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0308 1 249 Eukaryotic Initiation Factors Gene Family AT5G60390 70.035 1.51e-130 375