Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi04g0307 | ATGAACCACCCTGGCCAGATTGGAAATGGCTATGCTCCAGTCCTTGACTGCCACACTTCACACATTGCTGTGAAGTTTGCTGAACTCTTGACCAAGATTGATAGGCGATCAGGTAAAAAGCTTGAGAAAGAGCCCAAGTTCTTGAATAATGGTGACGCTGGGTTGGTCAAAATGATTCCCACCAAGCCCATGGTTGTTGAAACATTCTCCGAGTACCCTCCGCTTGGCAGGGCCTACAACATGGACGGTCTTTTCTTGGCTGTATCCTTTTTAGAGCATGAAGTTGTGTCCGAGGTGCTTCAGGACAGAAGTGATTGCACTCTGAATCTGATCCCACAATCAGATTGGTTCGTGGTATACTTTTCTTGTATCATCTACCTAGTAGCTTTAGGAGATGAAGACCGTAACATGTTACGAATCCATTTTGCATATGGCCATGGCCTCACGGGCTTCCAACCCAGCAACCACATTCACGTCTCTTGTGATTCTTAA | 492 | 0.4614 | MNHPGQIGNGYAPVLDCHTSHIAVKFAELLTKIDRRSGKKLEKEPKFLNNGDAGLVKMIPTKPMVVETFSEYPPLGRAYNMDGLFLAVSFLEHEVVSEVLQDRSDCTLNLIPQSDWFVVYFSCIIYLVALGDEDRNMLRIHFAYGHGLTGFQPSNHIHVSCDS | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi04g0307 | 163 | CDD | EF1_alpha_III | 1 | 77 | - | - | |
| Glsi04g0307 | 163 | Pfam | Elongation factor Tu C-terminal domain | 4 | 72 | IPR004160 | - | |
| Glsi04g0307 | 163 | PANTHER | ELONGATION FACTOR 1 ALPHA | 1 | 78 | - | - | |
| Glsi04g0307 | 163 | Gene3D | Translation factors | 1 | 87 | - | - | |
| Glsi04g0307 | 163 | FunFam | Elongation factor 1-alpha | 1 | 119 | - | - | |
| Glsi04g0307 | 163 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 1 | 78 | IPR009001 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi04g0307 | Glsi-ChrGlsi04 | 1992421 | 1993334 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi04g0307 | 1 | 107 | Eukaryotic Initiation Factors Gene Family | AT1G07930 | 70.642 | 2.82e-47 | 155 |