LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi04g0302	ATGAGTTCGGCATACGGCAATGCTGGGGAGTCGGTTAGGTTGAAGGAATGTATCACGGAGTTCTTCAAAGGGGCTGCCGAGATGACGGTGGAGTTGGGGAAAGGGTGTAGGGATATAGTGAAGCAGAGCTTGGTGAACGAGGATTCGTATATAGCGAGAAAGTTGGGAAGGGATTCATATGTTGTCAAGAGAATCAGAGGACCCTGTGAAAAGTTCTGTGGGAAATTGAGTTTCTTCAACGAGTACTTGCCGGAGGATAAGGATCCGCTGCACGCATGGTCTGTGATATTCTTTGTTTCATTGATCGCCTTTACAGCCGTATATGTAAATTTTGAACATGATCTGTCCACCGATTCTACGCCATCAACAAAGCAAGTGTTTGTACATCCCCCTAGTGCTAACCGAATAGTGCTTCCGGATGGTAGATACATGGCATATAAGGAGCGGGGTGTTCCAGCTGACAAAGCTAGATTTTCATTAATTGCTCCTCATACTTTTCTTTCCTCCCGGCTTGCAGGAATACCCGGAGTTAAAGATTCACTCCTTGAAGAGTTTGGTATTCACTTGCTGACATATGATCTTCCTGGTTTTGGTGAGAGTGATCCTCATCCCATCAGAAATCTGGAATCCTCAGCAACAGATATGTCATTTCTAGCAGATGCTCTTGGTGTCAACAAGTTCTGGGTTGTTGGTTACTCAAGTGGAAGTATGCATGCTTGGGCTGCACTAAGATACATTCCTGATAGACTTGCAGGTGCAGCCATGTTTGCCCCTATGGTGAATCCGTATGATCCCACCATGACAAGGGAAGAGAGACGAAGAACTTGGGAGAAATGGACACAAAAAAGGAAATTCATGTACATTTTATCTCGGAGATTTCCTAGATTTCTTGCTTTCTTCTATCAGCGAAGCTTCCTGTCAGGAAAGCATGGTCAGATTGATAGGTGGCTGTCATTATCTCTGGGAAAGAGGGATAAAGCACTAATGGAAGATCCAATCTATGAGGAATTCTGGCAAAGGGATGTGGAAGAGTCAATCAGGCAAGGAAATGTGAAACCCTTTGTAGAGGAATCTGCTTTGCAGGTCTCAAATTGGGGTTTCAGCCTTGCTGACATCAAGTTGCAGAAGAGAAAACGACGTAATGATGTGTTCAGTTGGCTTAAGTCAATATTCACAGCAAGGGAGGAGGAGTATATAGGCTTTCTTGGCCCAATACATATATGGCAGGGAATGGATGATAAAGTGGTTCCCCCATCGATGACTGATTTTGTGCACCGCATTCTACCTGGAGCTGCAGTACATAAACTCCCATATGAAGGCCATTTTACCTATATCTACTTCTGCGATGAATGCCATAGACAGATATTTACTACGCTTTTTGGAACCCCACAAGGCCCACTCAGCTTGTCATTTGATGTAGATCAAACTACTTTAGAAACTTGCTTAGAAGTCAATATTGAACAGCCAGAAGAAGTAGACACTGGTGATTCTACCGCGAATTAA	1503	0.4398	MSSAYGNAGESVRLKECITEFFKGAAEMTVELGKGCRDIVKQSLVNEDSYIARKLGRDSYVVKRIRGPCEKFCGKLSFFNEYLPEDKDPLHAWSVIFFVSLIAFTAVYVNFEHDLSTDSTPSTKQVFVHPPSANRIVLPDGRYMAYKERGVPADKARFSLIAPHTFLSSRLAGIPGVKDSLLEEFGIHLLTYDLPGFGESDPHPIRNLESSATDMSFLADALGVNKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPTMTREERRRTWEKWTQKRKFMYILSRRFPRFLAFFYQRSFLSGKHGQIDRWLSLSLGKRDKALMEDPIYEEFWQRDVEESIRQGNVKPFVEESALQVSNWGFSLADIKLQKRKRRNDVFSWLKSIFTAREEEYIGFLGPIHIWQGMDDKVVPPSMTDFVHRILPGAAVHKLPYEGHFTYIYFCDECHRQIFTTLFGTPQGPLSLSFDVDQTTLETCLEVNIEQPEEVDTGDSTAN	500

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi04g0302	500	PANTHER	HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED	121	461	-	-
	Glsi04g0302	500	SUPERFAMILY	alpha/beta-Hydrolases	134	445	IPR029058	-
	Glsi04g0302	500	Gene3D	alpha/beta hydrolase	127	448	IPR029058	-
	Glsi04g0302	500	Pfam	alpha/beta hydrolase fold	176	445	IPR000073	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi04g0302	Glsi-ChrGlsi04	1948541	1953039	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi04g0302	185	267	Acyl Lipid Metabolism Gene Families	AT4G02340	30.233	7.03e-06	46.2