Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0286 ATGCCTCTTTGGGTGATTTTAATGTTACCTAGAATGGAATCTTCTAAAGCTGAGCGCGTTCACACTGGGGAACTAAATGACATTCGCTTCTCGAGCGCGGAAAGCCCCTATATCTTCCTCTCACGACCACACTCCTGGCTTGTGCTCTGCTCGTGCCATTTCTGTCCTAGGGTTAACTCTTCTATTTCTCTTGCAGCAAAACCCCTATACCTTTCAAGAATCTTAGCCATGGGCAAATCTTACCCAACTGTGAGTCCTGATTACCAGAAGGCCGTGGAGAAGGCCAAGAAGAAGCTCAGGGGTCTGATCGCCGAAAAGAACTGTGCTCCGATCATGCTCCGTTTGGCATGGCATTCTGCTGGGACCTATGACGTGAAGACCAAGACCGGTGGCCCCTTTGGAACCATAAGGCATGCAGCTGAACTTGCCCACGGCGCTAATAACGGACTTGATATCGCTGTTAATCTATTGGAGCCCATCAAGAAGGATTTCCCAAACTTGTCTTACGCTGATTTTTACCAGTTGGCTGGGGTTGTTGCCGTTGAGGTCACTGGTGGGCCTGAAATTCCTTTCCATCCTGGAAGAGAGGACAAGCCTGAGCCACCTCAAGAGGGCCGCTTGCCTGATGCAACTAAGGGTAATGACCATTTGAGGGATGTATTTAAAAGCCAAATGGGACTTAGCGATCAGGATATCGTTGCTCTCTCTGGGGGTCACACCCTTGGAAGGTGCCACAAGGAGCGTTCTGGATTTGAGGGTGCATGGACCTCAAATCCTCTCATCTTTGACAATTCATACTTCGAGGTGCTCTTGAGTGGTGAGAAGGAAGGCCTCCTGCAACTGCCAAGTGATAAGGCACTTTTGAGTGACCCCGTATTCCGCCCCCTTGTTGAGAAATATGCTGCCGATGAAGATGCTTTCTTTGCTGATTATGCGGAGGCTCATCTAAAACTCTCTGAGCTTGGGTTTGCTGAAGCCTAA 981 0.4934 MPLWVILMLPRMESSKAERVHTGELNDIRFSSAESPYIFLSRPHSWLVLCSCHFCPRVNSSISLAAKPLYLSRILAMGKSYPTVSPDYQKAVEKAKKKLRGLIAEKNCAPIMLRLAWHSAGTYDVKTKTGGPFGTIRHAAELAHGANNGLDIAVNLLEPIKKDFPNLSYADFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPQEGRLPDATKGNDHLRDVFKSQMGLSDQDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFEVLLSGEKEGLLQLPSDKALLSDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAEA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0286 326 MobiDBLite consensus disorder prediction 188 213 - -
Glsi04g0286 326 MobiDBLite consensus disorder prediction 191 213 - -
Glsi04g0286 326 ProSitePatterns Peroxidases active site signature. 109 120 IPR019794 GO:0004601
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 225 246 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 247 271 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 141 165 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 88 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 299 323 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 127 137 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 166 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 185 197 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 206 223 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Plant ascorbate peroxidase signature 109 124 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 SUPERFAMILY Heme-dependent peroxidases 77 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 231 241 IPR019793 -
Glsi04g0286 326 FunFam Cytosolic ascorbate peroxidase 95 212 - -
Glsi04g0286 326 FunFam L-ascorbate peroxidase, cytosolic 208 315 - -
Glsi04g0286 326 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 83 322 IPR044831 GO:0004601|GO:0034599
Glsi04g0286 326 CDD ascorbate_peroxidase 81 326 - -
Glsi04g0286 326 Gene3D - 95 322 - -
Glsi04g0286 326 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Haem peroxidase superfamily signature 167 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Haem peroxidase superfamily signature 109 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 PRINTS Haem peroxidase superfamily signature 185 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 ProSiteProfiles Plant heme peroxidase family profile. 167 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 Pfam Peroxidase 96 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0286 326 Gene3D Peroxidase, domain 2 208 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0286 Glsi-ChrGlsi04 1863568 1866793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0286 156 318 Peroxidase AT4G16270 32.212 2.36e-17 80.1