Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0273 ATGAGTTCACTTAAGCTCTCCACATCTCTTATTTTTCAAGTTGTCTTCGCTGAAATAATCATGTTGGTCCTAGCTGCACCAGCAAAGCCTAGGCTCTTCAGAGAATACATAGGAGCTGAAGGCAAGAACGTTTCCTTTTCAGATGTACCCATCAATCCCAGTGTTGAATTCCACTTCATTCTCTCCTTTGCTATTGATTATACAAATTCTATTTCCTCTCCACGCCCCACCAACGGCGACTTTAGAGCCTACTGGGACACACAAAACCTCAACCCTTTTCATGTTTCTTCCATTAAGTCCCATCATCCAAGTGTCAAAGTAGCTTTGAGTCTTGGAGGTGATACCATAGGCGATGATCACAAGGTTTATTTCAAGCCTACTTCAGTTAACTCTTGGGTTCGAAATGCTATTTATTCTATAACTCAGATTGTAGAACAATATCAGCTGGATGGAATCGATATTGACTATGAACATTTCAAGGCAGATCCTGATACTTTTGCTGAGTGCATAGGGAAGCTTATCTTCTTCCTGAAACAAAATAGGATTATCTCCTTTGCATCTATAGCACCATACGAGGACGACGCAGTTCAATCGCATTACTTGGCTTTGTGGAGAAAATATGGGCATCTCATAGACTACGTTAACTTTCAGTTCTATGCCTATGACAATGGAACAACTATTCATAAGTTTATTGAATTCTTTGAGACCCAAAGCTCAAATTACAAAGGAGGTAAGGTGTTGGTGAGCTTTGGAACAGACGGAAGTGGGGGTTTATCCCCTGAACATGGGTTCTTTGAGGCATGTGCCATTCTTTCACGTGAGGGAAAACTTAATGGCATCTTTGTTTGGTCTGCGGATGACTCCAAAATGTTCAACTTTCGTTATGAGAATCGGTCACAAAGCTTTCTGGCTAGCACATACTAA 924 0.4102 MSSLKLSTSLIFQVVFAEIIMLVLAAPAKPRLFREYIGAEGKNVSFSDVPINPSVEFHFILSFAIDYTNSISSPRPTNGDFRAYWDTQNLNPFHVSSIKSHHPSVKVALSLGGDTIGDDHKVYFKPTSVNSWVRNAIYSITQIVEQYQLDGIDIDYEHFKADPDTFAECIGKLIFFLKQNRIISFASIAPYEDDAVQSHYLALWRKYGHLIDYVNFQFYAYDNGTTIHKFIEFFETQSSNYKGGKVLVSFGTDGSGGLSPEHGFFEACAILSREGKLNGIFVWSADDSKMFNFRYENRSQSFLASTY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0273 307 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 149 157 IPR001579 GO:0004553|GO:0005975
Glsi04g0273 307 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 31 307 IPR001223 GO:0005975
Glsi04g0273 307 SUPERFAMILY (Trans)glycosidases 29 299 IPR017853 -
Glsi04g0273 307 PRINTS 2-S globulin family signature 78 93 IPR000677 -
Glsi04g0273 307 PRINTS 2-S globulin family signature 134 156 IPR000677 -
Glsi04g0273 307 PRINTS 2-S globulin family signature 266 285 IPR000677 -
Glsi04g0273 307 PRINTS 2-S globulin family signature 30 43 IPR000677 -
Glsi04g0273 307 PRINTS 2-S globulin family signature 95 113 IPR000677 -
Glsi04g0273 307 CDD GH18_narbonin 32 288 - -
Glsi04g0273 307 Gene3D Glycosidases 30 306 - -
Glsi04g0273 307 PANTHER CHITINASE 2-LIKE 12 305 - -
Glsi04g0273 307 Pfam Glycosyl hydrolases family 18 58 228 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0273 Glsi-ChrGlsi04 1740105 1741028 Proximal