Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0263 ATGAACATCTCACTTGTCTTTCTTCAATTCCTACATGCCAAGATGTTGGATTGTAGAAACTTTGGCTTCTTCATTTGCGCCTTATCAATTTTACCCTTGCTATGCTTTTCTGCCAACTTCGTTCCTGTAGACAATTACCTAATAGACTGTGGAGCAACTGCCAATACTTCAGTAGGTAACCGCAACTTCGTGGCCGATAGGTTCTTCAAGAATCTCCTGTCTACCCAGCGTGATATTCTTGCCAATACCCCTTCTAAATCAATTACTTCCTTTGATGATTCACCTCTCTATCAAACGGCAAGAATCTTCACCGGCTCCTCAAAGTACACTTTTTCAATCAATCAAAAAGGAAGGCATTGGATCCGTCTTTATTTCTATCCATTTGTATATGAGAACTACAAATTGAGTACTGCAAATTTTACTGTCACCGCCCAAAATAACATCCTTCTCAGTAACTTCAGTGTGCAGCAAAATCCTGTTATGAAGGAATACTCTGTAAATGTGACTTCAGACACTCTGGTGATCACCTTTACCCCTTTTAGCAATTCCATTGCTTTTGTGAATGCAATTGAAGTTGTTTCAGTTCCCGATGACCTCATTGCTGATGATGCTATCACCATAAATCCATCAGCGAGTTACTCTGGGTTGTTGACACTGGCACTGGAGACAGTTTGGAGAATTAACATGGGTGGTCCAACTGTCTCCTCCGAAAATGACACCCTTCATCGAACTTGGGTTCCAGACCAAAATTTCCTAGTGCTGCATAACCTTGCCTCTAATTTTTCAAATATTGCTGCTGTCAAGTATATAGATGGTGGGCCAACAGAACTTACCGCCCCACCTTCTGTCTATGGCACTCTCACAGAGATGAACTCAGACAGTGATCCCCGTAGTAATTTCAATGTGACCTGGCAGTTTGATGTGGATACTGGATTTCAGTACCTTGTTCGACTTCACTTTTGTGACATAGTGAGTAAAGGTCTCAATGAACTCTACTTCAATGCCTACGTGGACTCCTACTTGGCTTATAGAGATCTTGATCCCAGTATGATAAATAATAATGTTTTGGGTGTTCCATTTTATAAGGATTTGGTTACAGACTCAATTGTCAGCAATAAAATTCGTGTAAGTATTGGCCCTTCTACTCTTAACAAGGATTACCCAAATGCCATTTTAAATGGGCTGGAGATCATGAAAATGAGTGATTCTATGGGCAGTCTGAGTGCAGCAACAGTTGTGATTAGTTCTTCTGGTTCAAACTCAAAGAAGAAAGTTGGTGTGATAGTCGGCGTGACTCTTGGGACATTTATTGCAGTGGTCTTGGCTGGATTTTTCTTTGTTTTGTGCAGAAGAAGACGTTTGGCACGACAAGGCCTTTCAAAGACATGGGTTCCCTTATCTGTCAATGATGGAACTTCTCACACCATGGGAAGTAAATATTCTAATGGCACAACAGCAAGTGCTGCTTCAAACTTTGGGTATCGCATCCCTTTTGTGGCAGTTCAGGAGGCTACAAACAACTTTGATGAGAGTTGGGTCATTGGGATTGGTGGTTTTGGAAAAGTATACAAGGGAGAACTAAATGATGGCACTAAAGTGGCAGTTAAGAGGGGTAATCCTCGGTCCCAGCAGGGGCTTGCAGAGTTCCAAACCGAAATTGAAATGCTGTCTCAGTTCAGACATCGCCATCTGGTGTCATTGATTGGGTATTGTGATGAAAAAAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAGAGTCATCTCTACGGTTCAGGTCTTCCAAGCTTGAGTTGGAAAGAAAGACTAGAGATATGCATTGGTTCGGCTAGAGGACTCCATTACCTTCATACTGGCTATTCTAAAGCAGTTATTCACCGTGATGTGAAGTCTGCAAATATCCTGCTTGATGAGAACCTCATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACAGGGCCCGAAATTGATCAGACGCATGTGAGCACAGCAGTCAAAGGGAGTTTTGGGTACCTTGATCCTGAGTATTTCAGGAGGCAACAATTAACAGAAAAGTCAGATGTTTATTCATTTGGGGTTGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTTATAGATCCTTCCCTTGCTAGGGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAAGGGCAGTTGGAGCAAATCATAGATCCTACACTTGCAGGGAAGATCAGACCAGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTTGACAGGCCATCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTCCAACTTCAAGAGGCAGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAATATGATTGGTGAACTCTCTCCACAGATCAACAACTTCAACCATGACGCAAGCGTTTCTGCTGCACAGTTTGAAGCTTCAGGTGTAGATGATCTGTCTGGTGTTTCAATGAGTAGGGTATTCTCACAGCTGGTGAAGTCTGAGGGGAGATGA 2547 0.4225 MNISLVFLQFLHAKMLDCRNFGFFICALSILPLLCFSANFVPVDNYLIDCGATANTSVGNRNFVADRFFKNLLSTQRDILANTPSKSITSFDDSPLYQTARIFTGSSKYTFSINQKGRHWIRLYFYPFVYENYKLSTANFTVTAQNNILLSNFSVQQNPVMKEYSVNVTSDTLVITFTPFSNSIAFVNAIEVVSVPDDLIADDAITINPSASYSGLLTLALETVWRINMGGPTVSSENDTLHRTWVPDQNFLVLHNLASNFSNIAAVKYIDGGPTELTAPPSVYGTLTEMNSDSDPRSNFNVTWQFDVDTGFQYLVRLHFCDIVSKGLNELYFNAYVDSYLAYRDLDPSMINNNVLGVPFYKDLVTDSIVSNKIRVSIGPSTLNKDYPNAILNGLEIMKMSDSMGSLSAATVVISSSGSNSKKKVGVIVGVTLGTFIAVVLAGFFFVLCRRRRLARQGLSKTWVPLSVNDGTSHTMGSKYSNGTTASAASNFGYRIPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGSARGLHYLHTGYSKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLAREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDASVSAAQFEASGVDDLSGVSMSRVFSQLVKSEGR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0263 848 PANTHER OS07G0166700 PROTEIN 495 785 IPR045272 GO:0004714|GO:0006468
Glsi04g0263 848 Gene3D - 45 196 - -
Glsi04g0263 848 Gene3D - 219 402 - -
Glsi04g0263 848 SUPERFAMILY Protein kinase-like (PK-like) 487 779 IPR011009 -
Glsi04g0263 848 ProSiteProfiles Protein kinase domain profile. 508 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0263 848 SMART serkin_6 508 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0263 848 FunFam Receptor-like protein kinase FERONIA 220 402 - -
Glsi04g0263 848 Gene3D Transferase(Phosphotransferase) domain 1 584 801 - -
Glsi04g0263 848 FunFam Receptor-like protein kinase FERONIA 584 799 - -
Glsi04g0263 848 Pfam Malectin-like domain 48 400 IPR024788 -
Glsi04g0263 848 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Glsi04g0263 848 CDD STKc_IRAK 514 779 - -
Glsi04g0263 848 FunFam receptor-like protein kinase FERONIA 472 583 - -
Glsi04g0263 848 Pfam Protein tyrosine and serine/threonine kinase 513 707 IPR001245 GO:0004672|GO:0006468
Glsi04g0263 848 Gene3D Phosphorylase Kinase; domain 1 470 583 - -
Glsi04g0263 848 FunFam Putative receptor-like protein kinase 45 196 - -
Glsi04g0263 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0263 Glsi-ChrGlsi04 1680285 1682831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0263 16 848 Receptor kinase-like Gene Family AT3G46290 66.071 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi04g0263 Malectin_like 1.2e-38 CL0202