Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0257 ATGAGAAGCGTCTTCTTTAAACCCTCAGGCTCTTTGCCTTCGGTGTCCATCCCATCTTCCTCATCTCAACGCACCTTCTCTGATTCATTAATGGAAGAGAACATTGAAATTGCTCGCTCCCTCATAACCAAATGGGATTCTGGGCAATCTAATTCTTACGCCAGGATCACTTCTCTTTTCAACGCCAACCGCCGAGAAGCTAGACAGTATCTTAACGCTGTGAAGGACTTGCAGTCCGCCATGCAGTACTTCCTCGCTCAGGGTTCCACCTCCCACAAGCTCGTCCAAGCTCAACGCTTGATGCAACTTGCCATGAAGAGGCTCGAGCAGGAATTCTGTCGTATATTAGCCGCCAACCGGGACCATTTGGATCCTGAATCGGTTTCAAGTCGGTCGTCGACGGATCAGAGGACGTCCAGCTTTTCTGACTTTGACGTGGAATCCTCCGAGGACGAGTTCCGTTTCACCGGCGACTTTATTACGGAGACGGAGAGGGTATCTATGCTTGCCATGGCGGATTTGAAAGCCATTGCGGACTGTATGATTTCGTCAGGGTATGGTAAAGAGTGTGTCAATGTTTACAAAACTATGAGAAAATCCATTGTGGATGAGGCACTGCATCATCTTGGAGTGGAAAAGCTGAGCTTGACTCAGGTCCAGAAAATGGATTGGGGGGTGCTCGAGTTGAAGATTAAGAGCTGGTTGAATGCAATCAAAGTGGCCGTCAGAACACTGTTTTACGGTGAGAGAGTTCTCTGCGATGGTATCTTCGTGACTTCAGAGAAAATCTTACAATCCTGCTTCGCTGAGATTTGCAAAGATGGCGCAATGCTTCTGTTTGGATTCCCCGATCTCGTCACAAAGTGCAAGAAATCCCCCGAGAAAATATTCAGGACTCTAGACTTGTACAAAGCAATCTCCGACAATTGGCCCCAAATTGAGTCCATCTTCTCATTTGAATCAACATCCACCATCCGATCACAGGCTGTCACTTCTCTAGTCAACCTCGGGAAGGCTGTTCGGACGACGCTCGCCGACTTCGAATCGGCAATTCAGAAAGAGTCCTCCAAGAAGCCAGTGCCAGGTGGTGGGGTCCACGCGCTCACGCGCTACGTCATGAACTACATGACATTCCTCGCTGATTACAGCAATATACTCGCCGATATAGTCGCCGATTGGCCGTTAACGGTACAATCTCCATTACCGGAGTCTTACTTTCGCAGTTCCAAACTCCAAGAAAACCAGTCATCGGCGATGTGTGAGCGGCTCGCTTGGCTGATACTCGTCATTCTCTGCAAAATTGACCGCAAAGCAGAGTTCTACAAGGACGTGGCACTTTCGTACCTATTTTTAGCCAATAACCTCCAATACGTCATCTCGAAGGTTCGTACATCCAATCTTAACTTCCTTCTTGGCGAGGATTGGTTGACAAAGAACGAATCGAAAGTTAAAGAGTACGTCTCCAAGTACGAACGCATGGGGTGGAGCAAGGTGTTGTCGTCGCTGCCTGAAAGTCCCACGGCGGAGATGCCGGCGGAGAAAGCCAAGGTTTGCTTCAAGAGTTTCAACGCCGCATTCCGCGAAGCGTATAGGAAACAGACCTCGTGGATAGTATCCGACCCGAAACTGCGAGACGAAATCAAAGTCTCGATAGCGTCGAAGCTGGTGCCGCGGTACCAGGAGTTCTACGAGAAGTATCGGGTCGGGTTGATAAGGGATAAAAAATCAGAGTCGGTTGTCAGATTTTCACCCGATGACCTGGGTATTTACCTTTCTGACATTTTGCTTGGGATGGAAGATTCGGGTAGCGTTTCGTCACTCTCTTTGTCGCCTTCTAGTCGCCCCACTCGTTCCTGA 1857 0.49 MRSVFFKPSGSLPSVSIPSSSSQRTFSDSLMEENIEIARSLITKWDSGQSNSYARITSLFNANRREARQYLNAVKDLQSAMQYFLAQGSTSHKLVQAQRLMQLAMKRLEQEFCRILAANRDHLDPESVSSRSSTDQRTSSFSDFDVESSEDEFRFTGDFITETERVSMLAMADLKAIADCMISSGYGKECVNVYKTMRKSIVDEALHHLGVEKLSLTQVQKMDWGVLELKIKSWLNAIKVAVRTLFYGERVLCDGIFVTSEKILQSCFAEICKDGAMLLFGFPDLVTKCKKSPEKIFRTLDLYKAISDNWPQIESIFSFESTSTIRSQAVTSLVNLGKAVRTTLADFESAIQKESSKKPVPGGGVHALTRYVMNYMTFLADYSNILADIVADWPLTVQSPLPESYFRSSKLQENQSSAMCERLAWLILVILCKIDRKAEFYKDVALSYLFLANNLQYVISKVRTSNLNFLLGEDWLTKNESKVKEYVSKYERMGWSKVLSSLPESPTAEMPAEKAKVCFKSFNAAFREAYRKQTSWIVSDPKLRDEIKVSIASKLVPRYQEFYEKYRVGLIRDKKSESVVRFSPDDLGIYLSDILLGMEDSGSVSSLSLSPSSRPTRS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0257 618 FunFam Exocyst subunit Exo70 family protein 53 603 - -
Glsi04g0257 618 Pfam Exo70 exocyst complex subunit 232 592 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi04g0257 618 MobiDBLite consensus disorder prediction 9 23 - -
Glsi04g0257 618 Gene3D Exocyst complex component Exo70 52 601 - -
Glsi04g0257 618 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 593 IPR004140 GO:0000145|GO:0006887
Glsi04g0257 618 SUPERFAMILY Cullin repeat-like 59 593 IPR016159 -
Glsi04g0257 618 MobiDBLite consensus disorder prediction 124 145 - -
Glsi04g0257 618 MobiDBLite consensus disorder prediction 129 143 - -
Glsi04g0257 618 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0257 Glsi-ChrGlsi04 1631818 1633674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0257 2 597 EXO70 exocyst subunit family AT2G39380 49.178 0.0 577